Project | Data Management Plan |
---|---|
Moorea Coral Reef Long-Term Ecological Research site |
Principal Investigator: Russell J. Schmitt (University of California-Santa Barbara)
Co-Principal Investigator: Sally J Holbrook
Co-Principal Investigator: Robert C Carpenter
Co-Principal Investigator: Peter J Edmunds
CORAL REEFS~2012~31~Adam, T. C.; Horii, S. S.~~1149-1154~~~~Patterns of resource-use and competition for mutualistic partners between two species of obligate cleaner fish~~~~~~~
PLOS ONE~2012~7~Bernardi, Giacomo; Beldade, Ricardo; Holbrook, Sally J.; Schmitt, Russell J.~~e44953~~~~Full-Sibs in Cohorts of Newly Settled Coral Reef Fishes~~~~~~~
BULLETIN OF MARINE SCIENCE~2012~88~Colvard, Nicholas B.; Edmunds, Peter J.~~1019-1033~~~~MACROALGAE ON SHALLOW TROPICAL REEFS REDUCE THE AVAILABILITY OF REFLECTED LIGHT FOR USE IN CORAL PHOTOSYNTHESIS~~~~~~~
CORAL REEFS~2012~31~Cumbo, V. R.; Edmunds, P. J.; Fan, T. -Y.~~1155-1155~~~~Scleractinian corals capture zooplankton within days of settlement and metamorphosis~~~~~~~
MARINE BIOLOGY~2012~159~Cumbo, V. R.; Fan, T. -Y.; Edmunds, P. J.~~2853-2866~~~~Physiological development of brooded larvae from two pocilloporid corals in Taiwan~~~~~~~
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES~2012~279~Dufault, Aaron M.; Cumbo, Vivian R.; Fan, Tung-Yung; Edmunds, Peter J.~~2951-2958~~~~Effects of diurnally oscillating pCO(2) on the calcification and survival of coral recruits~~~~~~~
JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY~2013~439~Cumbo, V. R.; Fan, T. Y.; Edmunds, P. J.~~100-107~~~~Effects of exposure duration on the response of Pocillopora damicornis larvae to elevated temperature and high pCO(2)~~~~~~~
JOURNAL OF EXPERIMENTAL BIOLOGY~2013~216~Dufault, Aaron M.; Ninokawa, Aaron; Bramanti, Lorenzo; Cumbo, Vivian R.; Fan, Tung-Yung; Edmunds, Peter J.~~1570-1577~~~~The role of light in mediating the effects of ocean acidification on coral calcification~~~~~~~
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES~2013~280~Comeau, S.; Carpenter, R. C.; Edmunds, P. J.~~20122374~~~~Coral reef calcifiers buffer their response to ocean acidification using both bicarbonate and carbonate~~~~~~~
LIMNOLOGY AND OCEANOGRAPHY~2013~58~Comeau, S.; Edmunds, P. J.; Spindel, N. B.; Carpenter, R. C.~~388-398~~~~The responses of eight coral reef calcifiers to increasing partial pressure of CO2 do not exhibit a tipping point~~~~~~~
Marine Biology~2013~160~Comeau, S., R.C. Carpenter and P.J. Edmunds~10.1007/s00227-012-2165-5~1127-1134~~~~Effects of feeding and light intensity on the response of the coral Porites rus to ocean acidification.~~~~~~~
INTEGRATIVE AND COMPARATIVE BIOLOGY~2013~53~Bramanti, L.; Edmunds, P. J.~~E22-E22~~~~Demographic models can forecast climate change effects on scleractinian corals: the Pocillopora damicornis case study~~~~~~~
JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY~2013~441~Brown, D.; Edmunds, P. J.~~62-70~~~~Long-term changes in the population dynamics of the Caribbean hydrocoral Millepora spp~~~~~~~
INTEGRATIVE AND COMPARATIVE BIOLOGY~2013~53~Edmunds, P. J.; Fan, T. Y.~~E60-E60~~~~Evidence that high pCO2 affects coral recruits through perturbed protein metabolism~~~~~~~
INTEGRATIVE AND COMPARATIVE BIOLOGY~2013~53~Lenz, E. A.; Edmunds, P. J.~~E317-E317~~~~Evidence that octocorals are increasing in population density in the Caribbean~~~~~~~
INTEGRATIVE AND COMPARATIVE BIOLOGY~2013~53~Rivest, E. B.; Chen, C. -S; Fan, T. -Y; Li, H. -H; Edmunds, P. J.; Hofmann, G. E.~~E360-E360~~~~Energetic consequences of ocean acidification and warming for coral larvae~~~~~~~
INTEGRATIVE AND COMPARATIVE BIOLOGY~2013~53~Wall, C. B.; Edmunds, P. J.~~E389-E389~~~~Elevated pCO(2) increases ammonium excretion in juvenile colonies of the scleractinian Seriatopora caliendrum~~~~~~~
INTEGRATIVE AND COMPARATIVE BIOLOGY~2013~53~Zamudio, S.; Bramanti, L.; Edmunds, P. J.~~E233-E233~~~~Temperature-induced maternal effects on the phenotype of larvae released by the brooding coral Pocillopora damicornis~~~~~~~
JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY~2012~434~Johnson, Maggie D.; Carpenter, Robert C.~~94-101~~~~Ocean acidification and warming decrease calcification in the crustose coralline alga Hydrolithon onkodes and increase susceptibility to grazing~~~~~~~
Marine Biology~2012~159~Edmunds P.J.~10.1007/s00227-012-2001-y~2149-2160~~~~Effect of pCO2 on the growth, respiration, and photophysiology of massive Porites spp. in Moorea, French Polynesia.~~~~~~~
Biological Bulletin~2012~223~Edmunds, P.J., H.M. Putnam and R.D. Gates~~226-235~~~~Photophysiological consequences of vertical stratification of Symbiodinium in tissue of the coral Porites lutea~~~~~~~
PLOS ONE~2012~7~Fabina, Nicholas S.; Putnam, Hollie M.; Franklin, Erik C.; Stat, Michael; Gates, Ruth D.~~e44970~~~~Transmission Mode Predicts Specificity and Interaction Patterns in Coral-Symbiodinium Networks~~~~~~~
SCIENCE~2013~339~Farrar, Christine E.; Forsman, Zac H.; Gates, Ruth D.; Leong, Jo-Ann C.; Toonen, Robert J.~~518-518~~~~Observing the Coral Symbiome Using Laser Scanning Confocal Microscopy~~~~~~~
MARINE POLLUTION BULLETIN~2013~66~Hedouin, Laetitia; Gates, Ruth D.~~221-224~~~~Assessing fertilization success of the coral Montipora capitata under copper exposure: Does the night of spawning matter?~~~~~~~
JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY~2012~434~Padilla-Gamino, Jacqueline L.; Hanson, Katharine M.; Stat, Michael; Gates, Ruth D.~~71-80~~~~Phenotypic plasticity of the coral Porites rus: Acclimatization responses to a turbid environment~~~~~~~
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES~2012~279~Putnam, Hollie M.; Stat, Michael; Pochon, Xavier; Gates, Ruth D.~~4352-4361~~~~Endosymbiotic flexibility associates with environmental sensitivity in scleractinian corals~~~~~~~
ADVANCES IN MARINE BIOLOGY, VOL 63~2012~63~Stat, Michael; Baker, Andrew C.; Bourne, David G.; Correa, Adrienne M. S.; Forsman, Zac; Huggett, Megan J.; Pochon, Xavier; Skillings, Derek; Toonen, Robert J.; van Oppen, Madeleine J. H.; Gates, Ruth D.; Lesser, M~~1-65~~~~MOLECULAR DELINEATION OF SPECIES IN THE CORAL HOLOBIONT~~~~~~~
Coral Reefs~2012~32~Padilla-Gamino, J.L., R.R. Bidigare, D.J. Barshis, A. Alamaru, L. Hedouin, X. Hernandez-Pech, F. Kandel, S.L.Soon, M.S. Roth, L.J. Rodrigues, A.G. Grottoli, C. Portocarrero, S.A. Wagenhauser, F. Buttler and R.D. Gates~10.1007/s00338-012-0957-1~137-152~~~~Are all eggs created equal? A case study from the Hawaiian reef-building coral Montipora capitata.~~~~~~~
JOURNAL OF EXPERIMENTAL BIOLOGY~2012~215~Mayfield, Anderson B.; Chan, Pei-Hsun; Putnam, Hollie M.; Chen, Chii-Shiarng; Fan, Tung-Yung~~4183-4195~~~~The effects of a variable temperature regime on the physiology of the reef-building coral Seriatopora hystrix: results from a laboratory-based reciprocal transplant~~~~~~~
Journal of Geophysical Research:Oceans~2013~118~Hench, J.L., and J.H. Rosman~10.1002/jgrc.20105~1142-1156~~~~Observations of spatial flow patterns at the coral colony scale on a shallow reef flat.~~~~~~~
ISME JOURNAL~2013~7~Nelson, Craig E.; Goldberg, Stuart J.; Kelly, Linda Wegley; Haas, Andreas F.; Smith, Jennifer E.; Rohwer, Forest; Carlson, Craig A.~~962-979~~~~Coral and macroalgal exudates vary in neutral sugar composition and differentially enrich reef bacterioplankton lineages~~~~~~~
Remote Sensing of Environment~2013~135~Siegel, D.A., M.J. Behrenfeld, S. Maritorena, C.R. McClain, D. Antoine, S.W. Bailey, P.S. Bontempi, E.S. Boss, H.M. Dierssen, S.C. Doney, R.E. Eplee Jr., R.H. Evans, G.C. Feldman, E. Fields, B.A. Franz, N.A. Kuring, C. Mengelt, N.B. Nelson, F.S. Patt, W.D~~77-91~~~~Regional to global assessments of phytoplankton dynamics from the SeaWiFS mission.~~~~~~~
Ecology and Evolution~2013~3~Stat M, X. Pochon, E.C. Franklin, J.F. Bruno, K.S. Casey, E.R. Selig and R.D. Gates.~10.1002/ece3.556~1317-1329~~~~Symbiodinium clade D correlates with a high cumulative frequency of thermal stress in Montipora but not Porites in Hawaii.~~~~~~~
Applied Optics~2013~52~Werdell, P.J., B.A. Franz, S.W. Bailey, G.C. Feldman, E. Boss, V.E. Brando, M. Dowell, T. Hirata, S.J. Lavender, Z. Lee, H. Loisel, S. Maritorena, F. Me?lin, T.S. Moore, T.J. Smyth, D. Antoine, E. Devred, O. Hembise Fanton d?Andon, and A. Mangin.~~2019-2037~~~~Generalized ocean color inversion model for retrieving marine inherent optical properties.~~~~~~~
LIMNOLOGY AND OCEANOGRAPHY~2011~56~Antoine, David; Siegel, David A.; Kostadinov, Tihomir; Maritorena, Stephane; Nelson, Norm B.; Gentili, Bernard; Vellucci, Vincenzo; Guillocheau, Nathalie~~955-973~~~~Variability in optical particle backscattering in contrasting bio-optical oceanic regimes~~~~~~~
Ecosphere~2011~2~Bestelmeyer, B.T., A.M. Ellison, W.R. Fraser, K.B. Gorman, S.J. Holbrook, C.M. Laney, M.O. Ohman, D.P.C. Peters, F.C. Pillsbury, A. Rassweiler, R.J. Schmitt and S. Sharma.~~129~~~~Analysis of abrupt transitions in ecological systems.~~~~~~~
Bulletin of the American Meteorological Society~2012~93~Siegel, D.A., D. Antoine, M.J. Behrenfeld, O. Hembise Fanton d?Andon, E. Fields, B.A. Franz, P. Goryl, S. Maritorena, C.R. McClain, M. Wang, and J.A. Yoder~~S107-S110~~~~Global ocean phytoplankton~~~~~~~
Oceanography~2013~26~Alldredge, A.L., C.A. Carlson and R.C. Carpenter~10.5670/oceanog.2013.52~108~~~~Sources of organic carbon to coral reef flats~~~~~~~
Marine Ecology Progress Series~2013~489~Alldredge, A.L., S.J. Holbrook, R.J. Schmitt, A.J. Brooks and H. Stewart~10.3354/meps10422~143~~~~Skeletal growth of four scleractinian corals is not enhanced by in situ mesozooplankton enrichment~~~~~~~
Annual Review of Marine Science~2014~6~Antoine, D., M. Babin, J.F. Berthon, A. Bricaud, B. Gentili, H. Loisel, S. Maritorena and D. Stramski~10.1146/annurev-marine-010213-135135~1~~~~Shedding light on the sea: André Morel?s legacy to optical oceanography~~~~~~~
Marine Ecology Progress Series~2013~490~Brown, A. and R.C. Carpenter~10.3354/meps10467~1~~~~Water flow mediated oxygen dynamics within massive Porites-algal turf interactions~~~~~~~
Smithsonian Contributions to the Marine Sciences~2013~39~Carr, M.H., D.P. Malone, M.A. Hixon, S.J. Holbrook and R.J. Schmitt~0196-0768~157~~~~How SCUBA changed our understanding of nature: underwater breakthroughs in reef fish ecology.~~~~~~~
Journal of Experimental Marine Biology and Ecology~2014~453~Comeau, S., R.C. Carpenter and P.J. Edmunds~10.1016/j.jembe.2013.12.013~28~~~~Effects of irradiance on the response of the coral Acropora pulchra and the calcifying alga Hydrolithon reinboldii to temperature elevation and ocean acidification~~~~~~~
Proceedings of the Royal Society B ? Biological Sciences~2013~280~Comeau, S., R.C. Carpenter and P.J. Edmunds~10.1098/rspb.2013.1153~20131153~~~~Response to: Coral reef calcification ? carbonate, bicarbonate and proton flux under conditions of increasing ocean acidification~~~~~~~
Marine Biology~2013~160~Cumbo, V.R., P.J. Edmunds, C.B. Wall and T.-Y. Fan~10.1007/s00227-013-2280-y~2903~~~~Brooded coral larvae differ in their response to high temperature and elevated pCO2 depending on the day of release~~~~~~~
Marine Ecology Progress Series~2013~489~Edmunds, P.J.~10.3354/meps10424~107~~~~Decadal-scale changes in the community structure of coral reefs in St. John, U.S. Virgin Islands~~~~~~~
Oceanography~2013~26~Edmunds, P.J., R.C. Carpenter and S. Comeau~10.5670/oceanog.2013.57~149~~~~Understanding the threats of ocean acidification to coral reefs~~~~~~~
Global Change Biology~2013~19~Fabina, N.S., H.M. Putnam, E.C. Franklin, M. Stat and R.D. Gates~10.1111/gcb.12320~3306~~~~Symbiotic specificity, association patterns, and function determine community responses to global changes: Defining critical research areas for coral-Symbiodinium symbioses~~~~~~~
Oceanography~2013~26~Forsman, Z.H., E. Johnston, A.J. Brooks, T. Adam and R.J. Toonen~10.5670/oceanog.2013.58~153~~~~Genetic evidence for regional isolation of Pocillopora corals from Moorea~~~~~~~
PeerJ~2013~1~Haas, A.F., C.E. Nelson, F. Rohwer, L.Wegley-Kelly, S.D. Quistad, C.A. Carlson, J.J. Leichter, M. Hatay and J.E. Smith~10.7717/peerj.108~e108~~~~Influence of coral and algal exudates on microbially mediated reef metabolism~~~~~~~
Oceanography~2013~26~Hofmann, G.E., C.A Blanchette, E.B. Rivest and L. Kapsenberg~10.5670/oceanog.2013.56~140~~~~Taking the pulse of marine ecosystems: The importance of coupling long-term physical and biological observations in the context of global change biology~~~~~~~
PLoS One~2014~9~Johnson, M., V. Moriarty, and R.C. Carpenter~10.1371/journal.pone.0087678~e87678~~~~Acclimatization of the crustose coraline alga Porolithon onkodes to variable pCO2~~~~~~~
Oceanography~2013~26~Leichter, J.J., A.L., Alldredge, G. Bernardi, A.J. Brooks, C.A. Carlson, R,C. Carpenter, P.J. Edmunds, M.R. Fewings, K.M. Hanson, J.L. Hench, S.J. Holbrook, C.E. Nelson, R.J. Schmitt, R.J. Toonan, L Washburn and A.S.J. Wyatt~10.5670/oceanog.2013.45~52~~~~Biological and physical interactions on a tropical island coral reef: transport and retention processes on Moorea, French Polynesia~~~~~~~
Coral Reefs~2013~32~Lesser, M.P., M. Stat and R.D. Gates~10.1007/s00338-013-1051-z~603~~~~The endosymbiotic dinoflagellates (Symbiodinium sp.) of corals are parasites and mutualists~~~~~~~
Coral Reefs~2013~32~Mayfield, A.B., T.-Y. Fan and C.-S. Chen~10.1007/s00338-013-1067-4~909~~~~Physiological acclimation to elevated temperature in a reef-building coral from an upwelling environment~~~~~~~
Journal of Physical Oceanography~2013~43~Monismith, S.G., L. M. M. Herdman, S.H. Ahmerkamp, and J.L. Hench~10.1175/JPO-D-12-0164.1~1356~~~~Wave transformation and wave-driven flow across a steep coral reef~~~~~~~
Biological Bulletin~2014~226~Padilla-Gamiño J.L., L. Hédouin, R.G. Waller, D. Smith, W. Truong and R.D. Gates~~8~~~~Sedimentation and the reproductive biology of the Hawaiian reef-building coral Montipora capitata~~~~~~~
Oceanography~2013~26~Page, H.M., A.J. Brooks, M. Kulbicki, R. Galzin, R.J. Miller, D. Reed, R.J. Schmitt, S.J. Holbrook and C. Koennigs~10.5670/oceanog.2013.61~180~~~~Stable isotopes reveal trophic relationships and diet of consumers in temperate kelp forest and coral reef ecosystems~~~~~~~
Coral Reefs~2014~33~Poray, A.K. and R.C. Carpenter~10.1007/s00338-013-1104-3~67~~~~Distributions of coral reef macroalgae in a back reef habitat in Moorea, French Polynesia~~~~~~~
Marine Biology~2013~160~Putnam, H.M., A.B. Mayfield, T.-Y. Fan, C.-S. Chen and R.D. Gates~10.1007/s00227-012-2129-9~2157~~~~The physiological and molecular responses of larvae from the reef-building coral Pocillopora damicornis exposed to near-future increases in temperatures and pCO2~~~~~~~
Marine Biology~2013~160~Smith, J.E., N.N. Price, C.E. Nelson and A.F. Haas~10.1007/s00227-013-2239-z~2437~~~~Coupled changes in oxygen concentration and pH caused by metabolism of benthic coral reef organisms~~~~~~~
Ecology and Evolution~2013~3~Stat M, X. Pochon, E.C. Franklin, J.F. Bruno, K.S. Casey, E.R. Selig and R.D. Gates~10.1002/ece3.556~1317~~~~The distribution of the thermally tolerant symbiont lineage (Symbiodinium clade D) in corals from Hawaii: correlations with host and the history of ocean thermal stress~~~~~~~
Marine Ecology Progress Series~2013~493~Stewart, H.L., N.N. Price, S.J. Holbrook, R.J. Schmitt and A.J. Brooks~10.3354/meps10525~155~~~~Determinants of the onset and strength of mutualistic interactions between branching corals and associate crabs~~~~~~~
Ecology~2013~94~Stier, A.C., S.W. Geange, K.M. Hanson and B.M. Bolker~10.1890/11-1983.1~1057~~~~Predator density and timing of arrival affect reef fish community assembly~~~~~~~
The American Naturalist~2013~182~Thompson, A.R., T.C. Adam, K.M. Hultgren and C.E. Thacker~10.1086/670803~E58~~~~Ecology and evolution affect network structure in an intimate marine mutualism~~~~~~~
Biological Bulletin~2013~225~Wall, C.B. and P.J. Edmunds~~92~~~~In situ effects of low pH and elevated HCO3- on juvenile massive Porites spp. in Moorea, French Polynesia~~~~~~~
Coral Reefs~2014~33~Wall, C.B., T.-Y. Fan and P.J. Edmunds~10.1007/s00338-013-1085-2~119~~~~Ocean acidification has no effect on thermal bleaching in the coral Seriatopora caliendrum~~~~~~~
Marine Ecology Progress Series~2014~501~Comeau, S., P.J. Edmunds, N.B. Spindel and R.C. Carpenter~10.3354/meps10690~99-111~~~~Diel pCO2 oscillations modulate the response of the coral Acropora hyacinthus to ocean acidification~~~~~~~
Limnology and Oceanography~2014~59~Comeau, S., P.J. Edmunds, N.B. Spindel and R.C. Carpenter~10.4319/lo.2014.59.3.1081~1081-1091~~~~Fast coral reef calcifiers are more sensitive to ocean acidification in short-term laboratory incubations~~~~~~~
Marine Biology~2014~161~Edmunds, P.J.~10.1007/s00227-014-2438-2~1531-1542~~~~Is acclimation beneficial to scleractinian corals, Porites spp.?~~~~~~~
Coral Reefs~2014~33~Gowan, J.C., J.S. Tootell and R.C. Carpenter~10.1007/s00338-014-1154-1~651-663~~~~The effects of water flow and sedimentation on interactions between massive Porites and algal turf~~~~~~~
Bulletin of Marine Science~2014~90~Lenz, E.A., D. Brown, C. Didden, A. Arnold, and P.J. Edmunds~10.5343/bms.2013.1049~681-692~~~~The distribution of hermit crabs and their gastropod shells on shallow reefs in St. John, USVI~~~~~~~
Global Change Biology~2014~20~Muller, E.B. and R.M. Nisbet~10.1111/gcb.12547~2031-2038~~~~Dynamic energy budget modeling reveals the potential of future growth and calcification for the coccolithophore Emiliania huxleyi in an acidified ocean~~~~~~~
PLoS One~2014~9~Rivest, E.B. and G.E. Hofmann~10.1371/journal.pone.0096172~e96172~~~~Responses of the metabolism of the larvae of Pocillopora damicornis to ocean acidification and warming~~~~~~~
Ecology~2014~~Stier, A.C., K.M. Hanson, S.J. Holbrook, R.J. Schmitt and A.J. Brooks~10.1890/12-1441.1~~~~~Predation and landscape characteristics independently affect reef fish community organization~~~~~~~
Ecological Applications~2014~24~Yau A.J., H.S. Lenihan and B.E. Kendall~10.1890/13-1201.1~1490-1504~~~~Management priorities vary with self-recruitment in harvested sedentary marine populations~~~~~~~
Marine Biology~2015~162~Brown, A. and R.C. Carpenter~10.1007/s00227-014-2593-5~459-468~~~~Water flow influences the mechanisms and outcomes of interactions between massive Porites and coral reef algae.~~~~~~~
Biogeosciences~2015~12~Comeau, S., R.C. Carpenter, C.A. Lantz and P.J. Edmunds~10.5194/bg-12-365-2015~365-372~~~~Ocean acidification accelerates dissolution of experimental coral reef communities.~~~~~~~
PeerJ~2015~3~Forsman, Z., G.M. Wellington, G.E. Fox and R.J. Toonen~10.7717/peerj.751~e751~~~~Clues to unraveling the coral species problem: distinguishing species from geographic variation in Porites across the Pacific with molecular markers and microskeletal traits.~~~~~~~
Marine Biology~2015~162~Gibbon, E.M., H.M. Putnam, R.D. Gates, M.R. Nitschke and S.K. Davy~10.1007/s00227-015-2617-9~717-723~~~~Species-specific differences in thermal tolerance may define susceptibility to intracellular acidosis in reef corals.~~~~~~~
Journal of Geophysical Research: Oceans~2015~120~Herdman, L.M.M., J.L. Hench and S.G. Monismith~10.1002/2014JC010145~1233-1252~~~~Heat balances and thermally-driven lagoon-ocean exchanges on a tropical coral reef system (Moorea, French Polynesia).~~~~~~~
PLoS One~2015~10~Holbrook, S.J., R.J. Schmitt, V. Messmer, A.J. Brooks, M. Srinivasan, P.L. Munday and G.P. Jones~10.1371/journal.pone.0124054~e0124054~~~~Reef fishes in biodiversity hotspots are at greatest risk from loss of coral species.~~~~~~~
Biological Bulletin~2015~65~Kearney, M.R., T. Domingos and R. Nisbet~10.1093/biosci/biv013~341-341~~~~Dynamic energy budget theory: An efficient and general theory for ecology.~~~~~~~
PLoS One~2015~10~Rivest, E.B. and T.C. Gouhier~10.1371/journal.pone.0121742~e0121742~~~~Complex environmental forcing across the biogeographical range of coral populations.~~~~~~~
Marine Ecology Progress Series~2015~521~Roth, M.S., J.L. Padilla_gamino, X. Pochon, R.R. Bidigare, R.D. Gates, C.M. Smith and H.L. Spalding~10.3354/meps11108~63-79~~~~Fluorescent proteins in dominant mesophotic reef-building corals.~~~~~~~
Scientific Reports~2015~5~Treibitz, T., B.P. Neal, D.I. Kline, O. Beijbom, P.L.D. Roberts, B.G. Mitchell and D. Kriegman~10.1038/srep07694~7694~~~~Wide field-of-view fluorescence imaging of coral reefs.~~~~~~~
Proceedings of the National Academy of Sciences~2015~112~vanOppen, M.J.H., J.K. Oliver, H.M. Putnam and R.D. Gates~gi/doi/10.1073/pnas~2307-2313~~~~Building coral reef resilience through assisted evolution.~~~~~~~
Oecologia~2014~176~Adam, T.C., A.J. Brooks, S.J. Holbrook, R.J. Schmitt, L. Washburn and G. Bernardi~10.1007/s00442-014-3011-x~285-296~~~~How will coral reef fish communities respond to climate-driven disturbances? Insight from landscape-scale perturbations.~~~~~~~
Bulletin of Marine Science~2014~90~Bowen, B.W., K. Shanker, N. Yasuda, M.C.D. Malay, S. von der Heyden, G. Paulay, L.A. Rocha, K.A. Selkoe, P.H. Barber, S.T. Williams, H.A. Lessios, E.D. Crandall, G. Bernardi, C.P. Meyer, K.E. Carpenter and R.J. Toonen~10.5343/bms.2013.1007~13-46~~~~Phylogeography unplugged: Comparative surveys in the genomic era.~~~~~~~
Biological Bulletin~2014~226~Byrne, M. and G.E. Hofmann~0006-3185~167-168~~~~Calcification in a changing ocean: Perspectives on a virtual symposium in the Biological Bulletin.~~~~~~~
Marine Ecology Progress Series~2014~508~Cameron C. and P.J. Edmunds~10.3354/meps10862~139-148~~~~Effects simulated fish predation on small colonies of massive Porites spp. and Pocillopora meandrina.~~~~~~~
Marine Ecology Progress Series~2014~517~Clausing, R.J., C. Annunziata, G. Baker, C. Lee, S.J. Bittick and P. Fong~10.3354/meps11029~121-129~~~~Effects of sediment depth on algal turf height are mediated by interactions with fish herbivory on a fringing reef.~~~~~~~
Coral Reefs~2015~34~Bramanti, L., M. Iannelli, T.-Y. Fan and P.J. Edmunds~10.1007/s00338-015-1269-z~505-515~~~~Using demographic models to project the effects of climate change on scleractinian corals: Pocillopora damicornis as a case study.~~~~~~~
Proceedings of the Royal Society B ? Biological Sciences~2014~281~Comeau S., R.C. Carpenter, Y. Nojiri, H.M. Putnam, K. Sakai and P.J. Edmunds~10.1098/rspb.2014.1339~20141339~~~~Pacific-wide contrast highlights resistance of reef calcifiers to ocean acidification.~~~~~~~
Nature Scientific Reports~2014~4~Comeau S., P.J. Edmunds, C.A. Lantz and R.C. Carpenter~10.1038/srep06681~6681~~~~Water flow modulates the response of coral reef communities to ocean acidification.~~~~~~~
Science~2014~344~Dornelas, M., N.J. Gotelli, B. McGill, H. Shimadzu, F. Moyes, C. Sievers and A.E. Magurran~10.1126/science.1248484~296-299~~~~Assemblage time series reveal biodiversity change but not systematic loss.~~~~~~~
Bulletin of Marine Science~2014~90~Edmunds, P.J.~10.5343/bms.2014.1027~999-1000~~~~Large numbers of Acropora palmata grow in shallow water in St. John, US Virgin Islands.~~~~~~~
Marine Ecology Progress Series~2014~509~Edmunds, P.J.~10.3354/meps10891~137-152~~~~Landscape-scale variation in coral reef community structure in the United States Virgin Islands.~~~~~~~
PLoS One~2014~9~Edmunds P.J., M. Adjeroud, M.L. Baskett, I.B. Baums, A.F. Budd, R.C. Carpenter, N. Fabina, T.-Y. Fan, E.C. Franklin, K. Gross, X. Han, L. Jacobson, J.S. Klaus, T.R. McClanahan, J.K. O?Leary, M.J.H. van Oppen, X. Pochon, H.M. Putnam, T.B. Smith, M.I. Stat,~10.1371/journal.pone.0107525~e107525~~~~Persistence and change in community composition of reef corals through past, present, and future climates.~~~~~~~
Marine Biology~2014~161~Edmunds, P. J., S.C. Burgess, H.M. Putnam, M.L. Baskett, L. Bramanti, N.S. Fabina, X. Han, M.P. Lesser, J.S. Madin, C.B. Wall, D.M. Yost and R.D. Gates~10.1007/s00227-014-2547-y~2719-2734~~~~Evaluating the causal basis of ecological success within the scleractinia: an integral projection model approach.~~~~~~~
Hydrobiologia~2014~734~Edmunds, P.J. and S.C. Gray~10.1007/s10750-014-1876-7~143-158~~~~The effects of storms, heavy rain, and sedimentation on the shallow coral reefs of St. John, US Virgin Islands.~~~~~~~
Journal of Experimental Marine Biology and Ecology~2014~454~Edmunds, P.J., Y. Nozawa and R.D. Villanueva~10.1016/j.jembe.2014.02.009~78-84~~~~Refuges modulate coral recruitment in the Caribbean and the Pacific.~~~~~~~
Marine Ecology Progress Series~2014~506~Edmunds, P.J., X. Pochon, D.R. Levitan, D.M. Yost, M. Belcaid, H.M. Putnam and R.D. Gates~10.3354/meps10808~129-144~~~~Long-term changes in Symbiodinium communities in Orbicella annularis in St. John, US Virgin Islands.~~~~~~~
Journal of Experimental Biology~2014~227~Edmunds, P.J. and C.B. Wall~~68-77~~~~Evidence that high pCO2 affects protein metabolism in tropical corals.~~~~~~~
Journal of Experimental Biology~2014~217~Gibbin, E.M., H.M. Putnam, S.K. Davy and R.D. Gates~10.1242/jeb.099549~1963-1969~~~~Intracellular pH and its response to CO2-driven seawater acidification in symbiotic versus non-symbiotic coral cells.~~~~~~~
Proceedings of the National Academy of Sciences~2014~111~Kelly, L.W., G. J. Williams, K.L. Barott, C.A. Carlson, E.A. Dinsdale, R.A. Edwards, A.F. Haas, M. Haynes, Y.W. Lim, T. McDole, C.E. Nelson, E. Sala, S.A. Sandin, J.E. Smith, M.J.A. Vermeij, M. Youle and F. Rohwer~10.1073/pnas.1403319111~10227-102~~~~Local genomic adaption of coral and algal-associated microbiomes to gradients of natural variability and anthropogenic stressors.~~~~~~~
Bulletin of Marine Science~2014~90~Keyse, J., E.D. Crandall, R.J. Toonen, C.P. Meyer, E.A. Treml and C. Riginos~10.5343/bms.2012.1107~47-78~~~~The scope of published population genetic data for Indo-Pacific marine fauna and future research opportunities in the region.~~~~~~~
Journal of Geophysical research: Oceans~2014~119~Leichter, J.J., M.D. Stokes, L.I. Vilchis and J. Fiechter~10.1002/2013JC009371~548-558~~~~Regional synchrony of tempertaure variation and internal wave forcing along the Florida Keys reef tract.~~~~~~~
Oecologia~2014~175~Levitan, D.R., P.J. Edmunds and K.E. Levitan~10.1007/s00442-013-2871-9~117-128~~~~What makes a species common? No evidence of density-dependent recruitment or mortality of the sea urchin Diadema antillarum after the 1983-1984 mass mortality.~~~~~~~
Bulletin of Marine Science~2014~90~Marti-Puig, P., Z.H. Forsman, R.D. Haverkort-Yeh, I.S.S. Knapp, J.E. Maragos and R. J. Toonen~10.5343/bms.2012.1080~211-231~~~~Extreme phenotypic polymorphism in the coral genus Pocillopora; Micro-morphology corresponds to mitochondrial groups, while colony morphology does not.~~~~~~~
PeerJ~2014~2~Pochon X, H.M. Putnam and R.D. Gates~10.7717/peerj.394~e394~~~~Multi-gene analysis of Symbiodinium dinoflagellates: a perspective on rarity, symbiosis, and evolution.~~~~~~~
Marine Biology~2014~161~Pochon, X., R.D. Gates, D. Vik and P.J. Edmunds~10.1007/s00227-014-2507-6~2307-2318~~~~Molecular characterization of symbiotic algae (Symbiodinium spp.) in soritid foraminifera (Sorites orbiculus) and a scleractinian coral (Orbicella annularis) from St John, US Virgin Islands.~~~~~~~
PLoS One~2014~9~Rivest, E.B. and G.E. Hofmann~10.1371/journal.pone.0096172~e96172~~~~Responses of the metabolism of the larvae of Pocillopora damicornis to ocean acidification and warming.~~~~~~~
PLoS One~2014~9~Sogin, M., P. Anderson, P. Williams, C.-S. Chen and R.D. Gates~10.1371/journal.pone.0111274~e111274~~~~Application of 1H-NMR metabolomic profiling for reef-building corals.~~~~~~~
Ecology~2014~95~Stier, A.C., K.M. Hanson, S.J. Holbrook, R.J. Schmitt and A.J. Brooks~10.1890/12-1441.1~1294-1307~~~~Predation and landscape characteristics independently affect reef fish community organization.~~~~~~~
Coral Reefs~2014~33~Tootell, J.S. and M.A. Steele~10.1007/s00338-014-1181-y~1145-1151~~~~Vermetid gastropods reduce foraging by herbivorous fishes on algae on coral reefs.~~~~~~~
Bulletin of Marine Science~2014~90~Von der Heyden, S., M. Berger, R. J. Toonen, L. van Herwerden, M. A. Juinio-Menez, R. Ravago-Gotanco, C. Fauvelot and G. Bernardi~10.5343/bms.2012.1079~123-158~~~~The application of genetics to marine management and conservation: Examples from the Indo-Pacific.~~~~~~~
Oceanography~2015~28~Andersson, A.J., D.I. Kline, P.J. Edmunds, S.D. Archer, N. Bednarsek, R.C Carpenter, M. Chadsey, P. Goldstein, A.G. Grottoli, T.P. Hurst, A.L. King, J.E. Kubler, I.B. Kuffner, K.R.M. Mackey, B.A. Menge, A. Paytan, U. Riebesell, A. Schnetzer, M.E. Warner a~http://dx.doi.org/10.5670/oceanog.2015.27~16~~~~. Understanding ocean acidification on organismal to ecological scales~~~~~~2016-06-09 19:44:17.513~
PLoS One~2015~~Beijbom, O., P.J. Edmunds, C. Roelfsema, J. Smith, D.I. Kline, B.P. Neal, M.J. Dunlap, V. Moriarty, T-Y Fan, C.-J. Tan, S. Chan, T. Treibitz, A. Gamst, B.G. Mitchell and D. Kriegman~http://dx.doi.org/10.1371/journal.pone.0130312~~~~~Towards automated annotation of benthic survey images: Variability of human experts and operational modes of automation~~~~~~2016-06-09 19:44:17.536~
Coral Reefs~2016~35~Bramanti, L. and P.J. Edmunds~10.1007/s00338-016-1413-4~543~~~~Density-associated recruitment mediates coral population dynamics on a coral reef~~~~~~2016-06-09 19:44:17.546~
Remote Sensing of Environment~2015~162~Brewin, R.J.W., S. Sathyendranath, D. Muller, C. Brockmann, P.Y. Deschamps, E. Devred, R. Doerffer, N.Fomferra, B. Franz, M. Grant, S. Groom, A. Horseman, C. Hu, H. Krasemann, Z. Lee, S. Maritorena, F. Meelin, M. Peters, T. Platt, P. Regner, T. Smyth, F.~10.1016/j.rse.2013.09.016~271~~~~The ocean colour climate change initiative: III. A round-robin comparison on in-water bio-optical algorithms~~~~~~2016-06-09 19:44:17.550~
Marine Biology~2016~163~Brown, D. and P.J. Edmunds~10.1007/s00227-016-2837-7~~~~~Differences in the responses of three scleractinians and the hydrocoral Millepora platyphylla to ocean acidification~~~~~~2016-06-09 19:44:17.553~
Coral Reefs~2016~35~Clausing, R.J. and P. Fong~10.1007/s00338-016-1403-6~669~~~~Environmental variability drives rapid and dramatic changes in nutrient limitation of tropical macroalgae with different ecological strategies~~~~~~2016-06-09 19:44:17.560~
Global Change Biology~2016~22~Comeau S., C.A. Lantz, P.J. Edmunds and R.C. Carpenter~10.1111/gcb.13023~1225~~~~Framework of barrier reefs threatened by ocean acidification~~~~~~2016-06-09 19:44:17.563~
Gigascience~2016~5~Davies, N., D. Field, D. Gavaghan, S.J. Holbrook, S. Planes, M. Troyer, M. Bonsall, J. Claudet, G. Roderick , R.J. Schmitt, L. Amaral Zettler,V. Berteaux, H.C. Bossin, C. Cabasse, A. Collin, J. Deck, T. Dell, J. Dunne, R. Gates, M. Harfoot, J.L. Hench, M.~10.1186/s13742-016-0118-5~~~~~Simulating social-ecological systems: the Island Digital Ecosystem Avatars (IDEA) consortium~~~~~~2016-06-09 19:44:17.573~
Limnology and Oceanography~2016~61~Edmunds, P.J., J.J. Leichter, E.C. Johnston, E.J. Tong and R.J. Toonen~10.1002/lno.10231~543~~~~Ecological and genetic variation in reef-building corals on four Society Islands~~~~~~2016-06-09 19:44:17.580~
Marine and Freshwater Research~2015~66~Edmunds, P.J., R. Steneck, R. Albright, R.C. Carpenter, A.P.Y. Chui, T.-Y.Fan, S. Harii, H. Kitano, H. Kurihara, L. Legendre, S. Mitarai, S. Muko, Y. Nozawa, J. Padillo-Gamino, N.N. Price, K. Sakai, G. Suzuki, M.J.H. vanOppen, A. Yarid and R.D. Gates~http://dx.doi.org/10.1071/MF14139~609~~~~Geographic variation in long-term trajectories of change in coral recruitment: a global-to-local perspective~~~~~~2016-06-09 19:44:17.583~
Marine Ecology Progress Series~2015~541~Evensen, N.R., P.J. Edmunds and K. Sakai~10.3354/meps11512~123~~~~Effects of pCO2 on spatial competition between the corals Montipora aequituberculata and Porites lutea~~~~~~2016-06-09 19:44:17.596~
Marine Biology~2016~163~Hanson, K.M., E.L. Schnarr and J.J. Leichter~10.1007/s00227-016-2849-3~77~~~~Non-random feeding enhances the contribution of oceanic zooplankton to the diet of the planktivorous coral reef fish Dascyllus flavicaudus~~~~~~2016-06-09 19:44:17.603~
Journal of Experimental Biology~2016~219~Jacobson, L.M., P.J. Edmunds, E.B. Muller and R.M. Nisbet~10.1242/jeb.136044~870~~~~The implications of reduced metabolic rate in resource-limited corals~~~~~~2016-06-09 19:44:17.603~
Frontiers in Marine Science~2016~3~Leenhardt, P., M. Lauer, R.M. Moussa, S.J. Holbrook, A. Rassweiler, R.J. Schmitt and J. Claudet~http://dx.doi.org/10.3389/fmars.2016.00070~70~~~~Complexities and uncertainties in transitioning small-scale coral reef fisheries~~~~~~2016-06-09 19:44:17.606~
Ecology~2015~96~Lenihan, H.S., J.L. Hench, S.J. Holbrook, R.J. Schmitt and M. Potoski~10.1890/14-1115.1~1540~~~~Hydrodynamics influence coral performance through simultaneous direct and indirect effects~~~~~~2016-06-09 19:44:17.610~
Journal of Experimental Biology~2015~218~Putnam, H.M. and R.D. Gates~10.1242/jeb.123018~1540~~~~. Preconditioning in the reef-building coral Pocillopora damicornis and the potential for trans-generational acclimatization in coral larvae under future climate change conditions~~~~~~2016-06-09 19:44:17.616~
Integrative and Comparative Biology~2016~56~Putnam, H.M., Davidson, J. and R.D. Gates~~e177~~~~Ocean acidification influences DNA methylation and phenotypic plasticity in environmentally susceptible corals.~~~~~~2016-06-09 19:44:17.620~
Journal of Experimental Marine Biology and Ecology~2015~473~Rivest, E.B. and G.E. Hofmann~10.1016/j.jembe.2015.07.015~43~~~~Effects of temperature and high pCO2 on lipid use and biological parameters of planulae of Pocillopora damicornis~~~~~~2016-06-09 19:44:17.623~
Metabolomics~2016~12~Sogin, E.M., H.M. Putnam, P.E. Anderson and R.D. Gates~10.?1007/?s11306-016-0987-8~~~~~Metabolomic signatures of increases in temperature and ocean acidification from the reef-building coral, Pocillopora damicornis~~~~~~2016-06-09 19:44:17.626~
Integrative and Comparative Biology~2016~56~Sternberg, D.R., H.R. Nelson and P.J. Edmunds~~e212~~~~Asexual budding and aggregated spatial distribution of fungiid corals from disturbed reefs in Moorea, French Polynesia.~~~~~~2016-06-09 19:44:17.653~
Oecologia~2016~181~Tootell J.S. and M.A. Steele~10.1007/s00442-015-3418-z~13~~~~Distribution, behavior, and condition of herbivorous fishes on coral reefs track algal resources~~~~~~2016-06-09 19:44:17.656~
Nature~2016~~Cinner, J.E., C. Huchery, M.A. MacNeil, N.A.J. Graham, T.R. McClanahan, J. Maina, E. Maire, J. Kittinger, C.C. Hicks, C. Mora, E. Allison, S. D?Agata, A. Hoey, D. Feary, L. Crowder, I. Williams, M. Kulbicki, L. Vigliola, L. Wantiez, G. Edgar, R. Stuart-Sm~~~~~~Bright spots among the world?s coral reefs.~~~~~~2017-05-10 20:13:34.156~
The American Biology Teacher~2016~78~Didden, C. and P.J. Edmunds~10.1525/abt.2016.78.4.278~~~~~Experiential Ecological Investigations as a Vehicle Coupling Teaching & Research in High Schools & Universities~~~~~~2017-05-10 20:13:34.256~
Ecosphere~2016~~Edmunds, P.J. and J.J. Leichter~~~~~~Spatial scale-dependent vertical zonation of coral reef community structure in French Polynesia~~~~~~2017-05-10 20:13:34.266~
BioScience~2016~~Edmunds, P.J., S. Comeau, C.A. Lantz, A. Andersson, C. Briggs, A. Cohen, J.-P. Gattuso, J.M. Grady, K. Gross, M. Johnson, E.B. Muller, J.B. Ries, S. Tambutté, E. Tambutté, A. Venn and R.C. Carpenter~~~~~~Integrating the effects of ocean acidification across functional scales on tropical coral reefs~~~~~~2017-05-10 20:13:34.283~
Marine Biology~2016~~Evensen N.R., and P.J. Edmunds~~~~~~Interactive effects of ocean acidification and neighboring corals on the growth of Pocillopora verrucosa.~~~~~~2017-05-10 20:13:34.293~
International Society for Photogrammetry and Remote Sensing~2016~41~Guo, T., A. Capra, M. Troyer, A. Gruen, A.J. Brooks, J.L. Hench, R.J. Schmitt, S.J. Holbrook and M. Dubbini~10.5194/isprs-archives-XLI-B5-821-2016~~~~~Accuracy Assessment of Underwater Photogrammetric Three Dimensional Modelling for Coral Reefs~~~~~~2017-05-10 20:13:34.296~
Scientific Data~2016~3~Madin, J.S., K.D. Anderson, M.H. Andreasen, T.C.L. Bridges, S.D. Cairns, S.R. Connolly, E.S. Darling, M. Diaz, D.S. Falster, E.C. Franklin, R.D. Gates, M.O. Hoogenboom, D. Huang, S.A. Keith, M.A. Kosnik, C.-Y.Kuo, J.M. Lough, C.E. Lovelock, O. Luiz, J. Ma~10.1038/sdata.2016.17~~~~~The coral traits database, a curated database of trait information for coral species from the global oceans~~~~~~2017-05-10 20:13:34.306~
Proceedings of the Royal Society B~2016~283~Quistad, S. D., Y.W. Lim, G.G.Z. Silva, C.E. Nelson, A.F. Haas, L.W. Kelly, R.A. Edwards, and F.L. Rohwer~10.1098/rspb.2016.1200~20161200~~~~Using viromes to predict novel immune proteins in non-model organisms.~~~~~~2017-05-10 20:13:34.313~
Ecology Letters~2016~19~Shantz, A.A., N.P. Lemoine and D.E. Burkepile~10.1111/ele.12538~~~~~Nutrient loading alters the performance of key nutrient exchange mutualisms~~~~~~2017-05-10 20:13:34.330~
Marine Biology~2016~163~Shaw, E.C., R.C. Carpenter, C.A. Lantz and P.J. Edmunds~10.1007/s00227-016-2986-8~~~~~Intraspecific variability in the response to ocean warming and acidification in the scleractinian coral Acropora pulchra~~~~~~2017-05-10 20:13:34.340~
ICES Journal of Marine Science~2017~74~Comeau, S., R.C. Carpenter and P.J. Edmunds~http://dx.doi.org/10.1093/icesjms/fsv267~1092~~~~Effects of pCO2 on photosynthesis and respiration of tropical scleractinian corals and calcified algae~~~~~~2018-11-05 19:50:10.800~
Coral Reefs~2012~31~Adam, T. C. and Horii, S. S.~https://doi.org/10.1007/s00338-012-0933-9~~~~~Patterns of resource-use and competition for mutualistic partners between two species of obligate cleaner fish~N~1149 to 1154~10023404~10023404~OSTI~2021-06-04 01:03:41.86~