Project | Data Management Plan |
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Significance of nitrification in shaping planktonic biodiversity in the ocean |
Principal Investigator: James W. Moffett (University of Southern California)
FEMS Microbiol. Lett.~2012~327~Merbt. S., D.A. Stahl, E.O. Casamayor, E. Martí, G.W. Nicol, and J.I. Prosser~~41~~~~Differential photoinhibition of bacterial and archaeal ammonia oxidation.~~~~~~~
Ann. Rev. Microbiol~2012~66~Stahl, D.A. and J.R. de la Torre~~83~~~~Physiology and Diversity of Ammonia-Oxidizing Archaea.~~~~~~~
Environ. Microbiol.~2012~14~Yan, J., C.M. Suzanne, H.J.M. Haaijer, H.J.M. Op den Camp, L. van Niftrik, H. Wessels, D.A. Stahl, M. Könneke, D. Rush, J.S.S. Damsté, Y.Y. Hu, and M.S.M. Jetten~~3146~~~~Mimicking the oxygen minimum zones: Stimulating interaction of aerobic archaeal and anaerobic bacterial ammonia oxidizers in a laboratory-scale model system.~~~~~~~
4rd Edition. Springer-Verlag, New York, New York~2013~~Stahl, D.A., J.J. Flowers, M. Hullar, and S. Davidson~~~~~~The structure and function of microbial communities.. In: E. Rosenberg, E.F. DeLong, F. Thompson, S. Lory, and Erko Stackebrandt (Eds.) The Prokaryotes~~~~~~~
Limnol. Oceanogr~2013~58~Amin, S.A., J.W. Moffett, W. Martens-Habbena, J. Jacquot, A. Devol, Anitra Ingalls, D.A. Stahl, and E.V. Armbrust.~~2037~~~~Copper requirements of the ammonia-oxidizing archaeon Nitrosopumilus maritimus SCM1 and implications for nitrification in the marine environment~~~~~~~
Annual Reviews: Earth and Planetary Sciences.~2013~41~Ingalls, A.E. and A. Pearson.~~359~~~~Assessing the origin and utility of archaeal lipids as marine environmental proxies.~~~~~~~
ISME J~2013~7~Horak, R.E.A., W. Qin, A. Schauer, E.V. Armbrust, A.E. Ingalls, J.W. Moffett, D.A. Stahl, and A.H. Devol.~~2023~~~~Ammonia oxidation kinetics and temperature sensitivity of a natural marine community dominated by Archaea.~~~~~~~
Appl. Environ. Microbiol~2013~79~Nakagawa, T. and D.A Stahl.~~6911~~~~Transcriptional response of the archaeal ammonia oxidizer Nitrosopumilus maritimus to low and environmentally relevant ammonia concentrations.~~~~~~~
Marine Chemistry~2014~162~Jacquot, J.E., R.E.A. Horak, S.A. Amin, A. Devol, A.E. Ingalls, E.V. Armbrust, D.A. Stahl, and J.W. Moffett.~~27~~~~The influence of copper bioavailability on nitrification in a dynamic estuary~~~~~~~
Proc. Natl. Acad. Sci.~2014~111~11. Qin, W., S.A. Amin, W. Martens-Habbena, H. Urakawa, A.H. Devol, J.W. Moffett, E.V.Armbrust, A.E. Ingalls, and D.A. Stahl.~10.1073/pnas.1324115111~12504~~~~Multiple physiological strategies drive adaptive radiation of marine ammonia-oxidizing archaea~~~~~~~
The ISME Journal~2013~7~7. Horak, R.E.A., W. Qin, A. Schauer, E.V. Armbrust, A.E. Ingalls, J.W. Moffett, D.A. Stahl, and A.H. Devol.~10.1038/ismej.2013.75~2023~~~~Ammonia oxidation kinetics and temperature sensitivity of a natural marine community dominated by Archaea.~~~~~~~
Limnol. Oceanogr.~2013~58~Amin, S.A., J.W. Moffett, W. Martens-Habbena, J. Jacquot, A. Devol, A. Ingalls, D.A. Stahl, and E.V. Armbrust.~~2037~~~~Copper requirements of the ammonia-oxidizing archaeon Nitrosopumilus maritimus SCM1 and implications for nitrification in the marine environment~~~~~~~
Limnology and Oceanography~2013~58~Amin, S.A., J.W. Moffett, W. Martens-Habbena, J. Jacquot, A. Devol, A. Ingalls, D.A. Stahl, and E.V. Armbrust.~~~~~~Copper requirements of the ammonia-oxidizing archaeon Nitrosopumilus maritimus SCM1 and implications for nitrification in the marine environment.~~~~~~2016-02-02 19:16:13.426~
Marine Chemistry~2014~162~Jacquot, J.E., R.E.A. Horak, S.A. Amin, A. Devol, A.E. Ingalls, E.V. Armbrust, D.A. Stahl, and J.W. Moffett.~~~~~~The influence of copper bioavailability on nitrification in a dynamic estuary.~~~~~~2016-02-02 19:16:13.430~
PNAS~2014~~Qin, W., S.A. Amin, W. Martens-Habbena, C.B. Walker, H. Urakawa, A.H. Devol, A.E. Ingalls, J.W. Moffett, E.V. Armbrust, and D.A. Stahl.~~~~~~Marine ammonia-oxidizing archaeal isolates display obligate mixotrophy and wide ecotypic variation.~~~~~~2016-02-02 19:16:13.436~
Environmental Microbiology~2015~~14. Martens-Habbena, W., W. Qin, R.E.A. Horak, H. Urakawa, A.J. Schauer, J.W. Moffett, E.V. Armbrust, A.E. Ingalls, A.H. Devol, and D.A. Stahl.~~~~~~14. Martens-Habbena, W., W. Qin, R.E.A. Horak, H. Urakawa, A.J. Schauer, J.W. Nitric oxide metabolism in ammonia-oxidizing archaea and its significance to marine nitrification.~~~~~~2016-02-02 19:16:13.440~