Principal Investigator: Andrew E. Allen (J. Craig Venter Institute, Inc.)
mSystems~2021~6~Diner, Rachel E. and Kaul, Drishti and Rabines, Ariel and Zheng, Hong and Steele, Joshua A. and Griffith, John F. and Allen, Andrew E. and Seyler, Lauren Marie~https://doi.org/10.1128/mSystems.00571-21~~~~~Pathogenic <i>Vibrio</i> Species Are Associated with Distinct Environmental Niches and Planktonic Taxa in Southern California (USA) Aquatic Microbiomes~~~10315721~10315721~OSTI~2022-02-08 21:03:19.376~
Science Advances~2021~7~McCain, J. Scott and Tagliabue, Alessandro and Susko, Edward and Achterberg, Eric P. and Allen, Andrew E. and Bertrand, Erin M.~https://doi.org/10.1126/sciadv.abg6501~~~~~Cellular costs underpin micronutrient limitation in phytoplankton~N~~10315754~10315754~OSTI~2022-02-09 01:03:22.46~
eLife~2021~10~Turnšek, Jernej and Brunson, John K and Viedma, Maria del and Deerinck, Thomas J and Horák, Aleš and Oborník, Miroslav and Bielinski, Vincent A and Allen, Andrew Ellis~https://doi.org/10.7554/eLife.52770~~~~~Proximity proteomics in a marine diatom reveals a putative cell surface-to-chloroplast iron trafficking pathway~~~10251969~10251969~OSTI~2021-06-23 01:03:49.370~
Nature Microbiology~2021~~Cohen, Natalie R. and McIlvin, Matthew R. and Moran, Dawn M. and Held, Noelle A. and Saunders, Jaclyn K. and Hawco, Nicholas J. and Brosnahan, Michael and DiTullio, Giacomo R. and Lamborg, Carl and McCrow, John P. and Dupont, Chris L. and Allen, Andrew E.~https://doi.org/10.1038/s41564-020-00814-7~~~~~Dinoflagellates alter their carbon and nutrient metabolic strategies across environmental gradients in the central Pacific Ocean~~~10210193~10210193~OSTI~2021-06-23 01:03:51.150~
Science Robotics~2020~5~Breier, John A. and Jakuba, Michael V. and Saito, Mak A. and Dick, Gregory J. and Grim, Sharon L. and Chan, Eric W. and McIlvin, Matthew R. and Moran, Dawn M. and Alanis, Brianna A. and Allen, Andrew E. and Dupont, Chris L. and Johnson, Rod~https://doi.org/10.1126/scirobotics.abc7104~~~~~Revealing ocean-scale biochemical structure with a deep-diving vertical profiling autonomous vehicle~~Article No. eabc7104~10203884~10203171~OSTI~2021-06-23 01:03:53.796~
Biology~2020~9~Tan, Maxine H. and Smith, Sarah R. and Hixson, Kim K. and Tan, Justin and McCarthy, James K. and Kustka, Adam B. and Allen, Andrew E.~https://doi.org/10.3390/biology9070155~~~~~The Importance of Protein Phosphorylation for Signaling and Metabolism in Response to Diel Light Cycling and Nutrient Availability in a Marine Diatom~~155~10251968~10251968~OSTI~2021-06-23 01:03:56.423~
Limnology and Oceanography~2020~65~Krause, Jeffrey W. and Brzezinski, Mark A. and Largier, John L. and McNair, Heather M. and Maniscalco, Michael and Bidle, Kay D. and Allen, Andrew E. and Thamatrakoln, Kimberlee~https://doi.org/10.1002/lno.11431~~~~~The interaction of physical and biological factors drives phytoplankton spatial distribution in the northern California Current~~p. 1974-1989~10164629~10456825~OSTI~2023-09-06 04:13:25.673~
Frontiers in Microbiology~2020~11~Moosburner, Mark Andrew and Gholami, Pardis K. and McCarthy, James A. and Tan, Maxine E. and Bielinski, Vincent and Allen, Andrew~10.3389/fmicb.2020.00005~~~~~Multiplexed Knockouts in the Model Diatom Phaeodactylum by Episomal Delivery of a Selectable Cas9~~~10133085~10133085~OSTI~2020-02-04 01:02:06.486~
Nature Communications~2019~10~Wu, Miao and McCain, J. Scott and Rowland, Elden and Middag, Rob and Sandgren, Mats and Allen, Andrew E. and Bertrand, Erin M.~10.1038/s41467-019-11426-z~~~~~Manganese and iron deficiency in Southern Ocean Phaeocystis antarctica populations revealed through taxon-specific protein indicators~~~10133078~10133078~OSTI~2020-02-04 01:02:06.990~
Proceedings of the National Academy of Sciences~2019~116~Coale, Tyler H. and Moosburner, Mark and Horák, Aleš and Oborník, Miroslav and Barbeau, Katherine A. and Allen, Andrew E.~10.1073/pnas.1907234116~~~~~Reduction-dependent siderophore assimilation in a model pennate diatom~~23609 to 23617~10133076~10133076~OSTI~2020-02-04 01:02:07.110~
Nature Microbiology~2019~4~Kranzler, Chana F. and Krause, Jeffrey W. and Brzezinski, Mark A. and Edwards, Bethanie R. and Biggs, William P. and Maniscalco, Michael P. and McCrow, John A. and Van Mooy, Benjamin D. and Bidle, Kay E. and Allen, Andrew and Thamatrakoln, Kimberlee~10.1038/s41564-019-0502-x~~~~~Silicon limitation facilitates virus infection and mortality of marine diatoms~~1790 to 1797~10133079~10133079~OSTI~2020-02-04 01:02:07.323~
The ISME Journal~2019~13~Kolody, B. C. and McCrow, J. P. and Allen, L. Zeigler and Aylward, F. O. and Fontanez, K. M. and Moustafa, A. and Moniruzzaman, M. and Chavez, F. P. and Scholin, C. A. and Allen, E. E. and Worden, A. Z. and Delong, E. F. and Allen, A. E.~https://doi.org/10.1038/s41396-019-0472-2~~~~~Diel transcriptional response of a California Current plankton microbiome to light, low iron, and enduring viral infection~~~10133077~10154396~OSTI~2024-02-14 15:03:20.560~
Proceedings of the National Academy of Sciences~2021~118~Jabre, Loay J. and Allen, Andrew E. and McCain, J. Scott and McCrow, John P. and Tenenbaum, Nancy and Spackeen, Jenna L. and Sipler, Rachel E. and Green, Beverley R. and Bronk, Deborah A. and Hutchins, David A. and Bertrand, Erin M.~https://doi.org/10.1073/pnas.2107238118~~~~~Molecular underpinnings and biogeochemical consequences of enhanced diatom growth in a warming Southern Ocean~N~e2107238118~10297910~10297910~OSTI~2022-02-09 01:03:22.700~
Limnology and Oceanography~2019~65~Stephens, Brandon M. and Wankel, Scott D. and Beman, J. Michael and Rabines, Ariel J. and Allen, Andrew E. and Aluwihare, Lihini I.~https://doi.org/10.1002/lno.11348~~~~~Euphotic zone nitrification in the California Current Ecosystem~~p. 790-806~10158612~10458716~OSTI~2023-09-07 20:05:45.723~