©2020 Biological and Chemical Oceanography Data Management Office.Funded by the U.S. National Science Foundation
©2020 Biological and Chemical Oceanography Data Management Office.Trichodesmium erythraeum was grown in biological triplicate under two CO2 regimes (380 and 750 uatm pCO2) and four different nutrient regimes (replete, phosphorus-limited,iron-limited, iron/phosphorus colimited).
Raw sequence reads from the Trichodesmium erythraeum used in this experiment can be accessed at The National Center for Biotechnology Information (NCBI) under the BioProject PRJNA312342.
Protein sequences can be accessed through NCBI BioProject PRJNA318.
The fasta file IMG_Trichodesmium_IMS101_genes.fasta (5.4 MB) contains all of the Integrated Microbial Genomes (IMG)-annotated genes in the Trichodesmium erythraeum IMS101 genome. More information can be found at the IMG Trichodesmium genome portal, "genes page" and IMG Genome ID 637000329 page.
Raw spectra are available as dataset PXD010515 in the PRIDE proteome-exchange repository (doi: 10.6019/PXD010515).
These results were published in:
* Walworth et al., 2016a
* Walworth et al., 2016b
* Walworth et al., 2018
Related dataset: Trichodesmium physiology and cell growth
Hutchins, D. A., Webb, E. A., Saito, M. A. (2018) Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 2) Version Date 2018-03-15 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/649873 [access date]
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