Dataset: Images of particles collected in sediment traps for quantitative analysis from multiple platforms from 2016-2017

Name: Images of particles collected in sediment traps for quantitative analysis from multiple platforms from 2016-2017
Published: 2018-11-07
Keywords: oceans

Release Date:2019-02-13Final no updates expectedDOI: 10.26008/1912/bco-dmo.749412.1Version 1 (2018-11-07)Dataset Type:Cruise Results

Principal Investigator: Colleen Durkin (Moss Landing Marine Laboratories)

Co-Principal Investigator: Margaret L. Estapa (Skidmore College)

Co-Principal Investigator: Melissa Omand (University of Rhode Island)

BCO-DMO Data Manager: Mathew Biddle (Woods Hole Oceanographic Institution)

Project: Collaborative Research: EAGER: Particle-specific DNA sequencing to directly observe ecological mechanisms of the biological pump (EAGER DNA BioPump)

Abstract

Images of particles collected in sediment traps for quantitative analysis from multiple platforms from 2016-2017

Cite Dataset

Spatial Extent: N:39.94 E:-70.81 S:21.52 W:-151.78
Temporal Extent: 2016-06-13 - 2017-11-07

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Samples were collected at the New England shelf break aboard the R/V Endeavor on 3-7 November 2017 (EN572) and 13-18 June 2016 (EN581) and on a transit between Honolulu, Hawaii and Portland, Oregon aboard the R/V Falkor between 24 January-20 February, 2017 (FK170124). Sediment trap collector tubes were deployed on various platform designs, including a neutrally-buoyant sediment trap (NBST), a surface tethered sediment trap (STST), and a Wire Walker (WW) trap. The location, time, duration, depth, and collection types from each trap deployment are listed in Trap Deployment Log.

Related Datasets

IsRelatedTo

Dataset: Particle Flux

Durkin, C., Estapa, M. L., Omand, M. (2021) Particle fluxes calculated from gel trap images taken on R/V Endeavor and R/V Falkor cruises off the New England shelf break and in the North Pacific during 2016-2017. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2021-04-08 doi:10.26008/1912/bco-dmo.847036.1

IsSourceOf

Dataset: Classified particle images
Relationship Description: Particles detected in gel image micrographs were manually sorted into distinct classes.

Durkin, C., Estapa, M. L., Omand, M. (2021) Images and associated metadata of individually classified particles imaged and quantified in sediment trap gel layers collected on four research cruises conducted between 2015 and 2018. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2021-09-14 doi:10.26008/1912/bco-dmo.860725.1

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General

Durkin, C. A., Estapa, M. L., & Buesseler, K. O. (2015). Observations of carbon export by small sinking particles in the upper mesopelagic. Marine Chemistry, 175, 72–81. doi:10.1016/j.marchem.2015.02.011

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Dataset: Images of particles collected in sediment traps for quantitative analysis from multiple platforms from 2016-2017

Release Date:2019-02-13Final no updates expectedDOI: 10.26008/1912/bco-dmo.749412.1Version 1 (2018-11-07)Dataset Type:Cruise Results

Principal Investigator: Colleen Durkin (Moss Landing Marine Laboratories)

Co-Principal Investigator: Margaret L. Estapa (Skidmore College)

Co-Principal Investigator: Melissa Omand (University of Rhode Island)

BCO-DMO Data Manager: Mathew Biddle (Woods Hole Oceanographic Institution)

Project: Collaborative Research: EAGER: Particle-specific DNA sequencing to directly observe ecological mechanisms of the biological pump (EAGER DNA BioPump)

Abstract

Images of particles collected in sediment traps for quantitative analysis from multiple platforms from 2016-2017

Cite Dataset

Spatial Extent: N:39.94 E:-70.81 S:21.52 W:-151.78
Temporal Extent: 2016-06-13 - 2017-11-07

XXX

Views

XX

Downloads

X

Citations

Related Datasets

IsRelatedTo

Dataset: Particle Flux

IsSourceOf

Dataset: Classified particle images
Relationship Description: Particles detected in gel image micrographs were manually sorted into distinct classes.

Related Publications

General

File(s)	Type	Description	Action
trap_deploy_log.csv (2.49 KB)	Comma Separated Values (.csv)	Primary data file for dataset ID 749412	Download
FK170124_Gel_Images_after_freezing.tar.gz (21.88 GB)	GZIP (.gz)	Geltrap micrographs of particles collected in sediment traps for quantitative analysis from cruise FK170124.	Download
FK170124_Gel_Images.tar.gz (33.33 GB)	GZIP (.gz)	Geltrap micrographs of particles collected in sediment traps for quantitative analysis from cruise FK170124.	Download
EN581_Gel_Images.tar.gz (75.77 MB)	GZIP (.gz)	Geltrap micrographs of particles collected in sediment traps for quantitative analysis from cruise EN581.	Download
EN572_Gel_Images.tar.gz (138.03 MB)	GZIP (.gz)	Geltrap micrographs of particles collected in sediment traps for quantitative analysis from cruise EN572.	Download

File(s)	Type	Description	Action
trap_deploy_log.csv (2.49 KB)	Comma Separated Values (.csv)	Primary data file for dataset ID 749412	Download
FK170124_Gel_Images_after_freezing.tar.gz (21.88 GB)	GZIP (.gz)	Geltrap micrographs of particles collected in sediment traps for quantitative analysis from cruise FK170124.	Download
FK170124_Gel_Images.tar.gz (33.33 GB)	GZIP (.gz)	Geltrap micrographs of particles collected in sediment traps for quantitative analysis from cruise FK170124.	Download
EN581_Gel_Images.tar.gz (75.77 MB)	GZIP (.gz)	Geltrap micrographs of particles collected in sediment traps for quantitative analysis from cruise EN581.	Download
EN572_Gel_Images.tar.gz (138.03 MB)	GZIP (.gz)	Geltrap micrographs of particles collected in sediment traps for quantitative analysis from cruise EN572.	Download

Dataset: Images of particles collected in sediment traps for quantitative analysis from multiple platforms from 2016-2017

Principal Investigator: Colleen Durkin (Moss Landing Marine Laboratories)

Co-Principal Investigator: Margaret L. Estapa (Skidmore College)

Co-Principal Investigator: Melissa Omand (University of Rhode Island)

BCO-DMO Data Manager: Mathew Biddle (Woods Hole Oceanographic Institution)

Project: Collaborative Research: EAGER: Particle-specific DNA sequencing to directly observe ecological mechanisms of the biological pump (EAGER DNA BioPump)

Abstract

ERDDAP

Metadata

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Related Datasets

Related Publications

Dataset: Images of particles collected in sediment traps for quantitative analysis from multiple platforms from 2016-2017

Principal Investigator: Colleen Durkin (Moss Landing Marine Laboratories)

Co-Principal Investigator: Margaret L. Estapa (Skidmore College)

Co-Principal Investigator: Melissa Omand (University of Rhode Island)

BCO-DMO Data Manager: Mathew Biddle (Woods Hole Oceanographic Institution)

Project: Collaborative Research: EAGER: Particle-specific DNA sequencing to directly observe ecological mechanisms of the biological pump (EAGER DNA BioPump)

Abstract

ERDDAP

Metadata

XXX

XX

X

Related Datasets

Related Publications