File(s)	Type	Description	Action
768259_v2_bender-ross-sea-peptides.csv (1.09 MB)	Comma Separated Values (.csv)	Primary data file for dataset ID 768259, version 2. Corresponds to Ocean Protein Portal Bender-Ross Sea data (version 1) .	Download What is ERDDAP? SUBSET DATA VIEW TABLE CSV TSV MATLAB netCDF

Files

Filename: 768259_v2_bender-ross-sea-peptides.csv (1.09 MB)
Type: Comma Separated Values (.csv)
Description: Primary data file for dataset ID 768259, version 2. Corresponds to Ocean Protein Portal Bender-Ross Sea data (version 1) .

Download

These data are part of the Ocean Protein Portal "Ross Sea Net Tow (Bender)" dataset version 1 (https://proteinportal.whoi.edu/; Saito et al., 2020).

Protein Portal (2024). Ocean Protein Portal. Available from https://proteinportal.whoi.edu/

IsRelatedTo

Dataset: Ross Sea metaproteome FASTA files
Relationship Description: Generated from the same sampling event and methodology. These data are part of the same dataset "Ross Sea Net Tow (Bender)" version 1 at the Ocean Protein Portal (https://proteinportal.whoi.edu/).

Saito, M. A. (2024) FASTA file of protein identifications from net tows during RVIB Nathaniel B. Palmer cruise NBP0601 in December of 2015. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2019-05-17 doi:10.26008/1912/bco-dmo.769266.1

IsRelatedTo

Dataset: Ross Sea metaproteome protein spectral counts
Relationship Description: Generated from the same sampling event and methodology. These data are part of the same dataset "Ross Sea Net Tow (Bender)" version 1 at the Ocean Protein Portal (https://proteinportal.whoi.edu/).

Saito, M. A. (2024) Ross Sea metaproteome protein spectral counts searched against Phaeocystis strain transcriptome from net tows during RVIB Nathaniel B. Palmer cruise NBP0601 in December of 2015. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2024-04-29 doi:10.26008/1912/bco-dmo.768237.1

Results

Bender, S. J., Moran, D. M., McIlvin, M. R., Zheng, H., McCrow, J. P., Badger, J., … Saito, M. A. (2018). Colony formation in Phaeocystis antarctica connecting molecular mechanisms with iron biogeochemistry. Biogeosciences, 15(16), 4923–4942. doi:10.5194/bg-15-4923-2018

Methods

Saito, M. A., Bertrand, E. M., Duffy, M. E., Gaylord, D. A., Held, N. A., Hervey, W. J., Hettich, R. L., Jagtap, P. D., Janech, M. G., Kinkade, D. B., Leary, D. H., McIlvin, M. R., Moore, E. K., Morris, R. M., Neely, B. A., Nunn, B. L., Saunders, J. K., Shepherd, A. I., Symmonds, N. I., & Walsh, D. A. (2019). Progress and Challenges in Ocean Metaproteomics and Proposed Best Practices for Data Sharing. Journal of Proteome Research, 18(4), 1461–1476. https://doi.org/10.1021/acs.jproteome.8b00761

Related Research

Saito, M. A., Saunders, J. K., Chagnon, M., Gaylord, D. A., Shepherd, A., Held, N. A., Dupont, C., Symmonds, N., York, A., Charron, M., & Kinkade, D. B. (2020). Development of an Ocean Protein Portal for Interactive Discovery and Education. Journal of Proteome Research, 20(1), 326–336. https://doi.org/10.1021/acs.jproteome.0c00382

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File(s)	Type	Description	Action
768259_v2_bender-ross-sea-peptides.csv (1.09 MB)	Comma Separated Values (.csv)	Primary data file for dataset ID 768259, version 2. Corresponds to Ocean Protein Portal Bender-Ross Sea data (version 1) .	Download What is ERDDAP? SUBSET DATA VIEW TABLE CSV TSV MATLAB netCDF

Files

Download

These data are part of the Ocean Protein Portal "Ross Sea Net Tow (Bender)" dataset version 1 (https://proteinportal.whoi.edu/; Saito et al., 2020).

Protein Portal (2024). Ocean Protein Portal. Available from https://proteinportal.whoi.edu/

IsRelatedTo

Results

Methods

Related Research

Dataset: Ross Sea metaproteome peptide spectral counts searched against Phaeocystis strain transcriptome from net tows during RVIB Nathaniel B. Palmer cruise NBP0601 in December of 2015

Principal Investigator: Mak A. Saito (Woods Hole Oceanographic Institution)

Contact: Sara Bender (Woods Hole Oceanographic Institution)

BCO-DMO Data Manager: Amber D. York (Woods Hole Oceanographic Institution)

Program: Ocean Carbon and Biogeochemistry (OCB)

Project: Controls of Ross Sea Algal Community Structure (CORSACS)

Abstract

XXX

XX

X

Files

Related Datasets

Related Publications

Dataset: Ross Sea metaproteome peptide spectral counts searched against Phaeocystis strain transcriptome from net tows during RVIB Nathaniel B. Palmer cruise NBP0601 in December of 2015

Principal Investigator: Mak A. Saito (Woods Hole Oceanographic Institution)

Contact: Sara Bender (Woods Hole Oceanographic Institution)

BCO-DMO Data Manager: Amber D. York (Woods Hole Oceanographic Institution)

Program: Ocean Carbon and Biogeochemistry (OCB)

Project: Controls of Ross Sea Algal Community Structure (CORSACS)

Abstract

XXX

XX

X

Files

Related Datasets

Related Publications

Dataset: Ross Sea metaproteome peptide spectral counts searched against Phaeocystis strain transcriptome from net tows during RVIB Nathaniel B. Palmer cruise NBP0601 in December of 2015

Principal Investigator: Mak A. Saito (Woods Hole Oceanographic Institution)

Contact: Sara Bender (Woods Hole Oceanographic Institution)

BCO-DMO Data Manager: Amber D. York (Woods Hole Oceanographic Institution)

Program: Ocean Carbon and Biogeochemistry (OCB)

Project: Controls of Ross Sea Algal Community Structure (CORSACS)

Abstract

Metadata

XXX

XX

X

Files

Related Datasets

Related Publications

Dataset: Ross Sea metaproteome peptide spectral counts searched against Phaeocystis strain transcriptome from net tows during RVIB Nathaniel B. Palmer cruise NBP0601 in December of 2015

Principal Investigator: Mak A. Saito (Woods Hole Oceanographic Institution)

Contact: Sara Bender (Woods Hole Oceanographic Institution)

BCO-DMO Data Manager: Amber D. York (Woods Hole Oceanographic Institution)

Program: Ocean Carbon and Biogeochemistry (OCB)

Project: Controls of Ross Sea Algal Community Structure (CORSACS)

Abstract

Metadata

XXX

XX

X

Files

Related Datasets

Related Publications