©2020 Biological and Chemical Oceanography Data Management Office.Funded by the U.S. National Science Foundation
©2020 Biological and Chemical Oceanography Data Management Office.Genetic sequence identifiers for Etelis samples collected in the Indo-Pacific Ocean between 1997 and 2012. These data were published in Andrews et al. (2021).
The holotype was purchased at Yanbu fish market after being collected by hook and line in a nearby area and was deposited at the National Museum of Marine Biology & Aquarium (NMMB-P). Fifteen paratypes were obtained from Western Australia and deposited at the fish collection of California Academy of Sciences, San Francisco (CAS). These paratypes were part of a previous study using morphological and genetic data which revealed that two morphologically similar species were being identified as E. carbunculus, leading the authors to propose an undescribed species of Etelis (Andrews et al. 2016). That study generated DNA sequence data from cytochrome b (cytb) for the paratypes, and the sequences have been deposited in GenBank (Accession numbers MW151867- MW151881). See "Related Datasets" for links to the NCBI Popsets that contain these sequences.
[See Related Dataset "Etelis morphology" https://www.bco-dmo.org/dataset/873174 for morphological measurements, meristics for the Etelis samples. The column "Field_ID" can be used to relate the Etelis genetics and Etelis morphology datasets.]
DNA sequences from cytb and cytochrome oxidase I (COI) were obtained from the E. boweni holotype and four E. radiosus specimens from the Yanbu fish market using previously described protocols (Andrews et al. 2016). The sequences were aligned with sequences used in phylogenetic analyses in Andrews et al. 2016, including cytb and COI sequences from six E. boweni and six E. carbunculus specimens collected across the Indo-Pacific, along with sequences from all other recognized Etelis species (six E. coruscans specimens, seven E. radiosus specimens, five E. oculatus specimens), and one specimen from each of two outgroups (Pristipomoides filamentosus and Aphareus rutilans). All sequences were then trimmed to a common length for each locus, for a total of 375 bp for cytb and 599 bp for COI.
Location: Indo-Pacific
Species List:
Bowen, B., Andrews, K. R. (2022) Genetic sequence identifiers for Etelis samples collected in the Indo-Pacific Ocean between 1997 and 2012. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2022-04-21 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.873427.1 [access date]
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