This dataset includes spectrophotometer absorbance for selected incubations showing shift in trough location at 320nm from experiments conducted on the R/V Atlantic Explorer (cruise number AE1825) in September, 2018. Samples were collected from the Bermuda Atlantic Time Series (BATS) and Hydrostation S (HYDRO) (32°N, 64°W) at 21 and 10 separate depths, respectively, between 1-4500m (BATS) and 1-500m (Hydro). See "Related Datasets" section for other data from these experiments which include ...
Show moreSeawater was collected from the Bermuda Atlantic Time Series (BATS) and Hydrostation S (Hydro) sites in the Sargasso Sea in September 2018. Depth profile investigations at BATS were taken at 32.343⁰N 64.594⁰W at 21 separate depths between 1m and 4500m. Hydrostation S samples were taken at 32.165⁰N 64.501⁰W at 10 depths between 1m and 500m. Incubation water was taken from two depths (1m and 240m) and collected into four carboys (two euphotic (1m) and two subphotic (240m)). One carboy from each depth was filtered using a 0.2µm filter to remove bacteria and other biology and particles while another was left unfiltered. 129I (t1/2 ~15.7 My) (Eckert and Ziegler Isotope Products ©) (Hardisty et al., 2020, Hardisty et al., 2021), was added directly to each of the carboys at a targeted concentration of ~70nM 129I- for investigating iodine redox reactions in natural seawater over time. 129I- was added before aliquoting the carboy water for individual incubations to ensure homogenous 129I- concentrations at t0 for all incubations. 200ml from each carboy were fractionated into separated incubation containers. Samples for t0 were immediately subsampled from spiked incubation containers, with this and subsequent (t1, t2, tf) subsamples being ~50ml. All subsamples were immediately filtered at 0.2µm to end interaction with biology after sampling. Subsamples were refrigerated and stored at 4°C until they returned to Michigan State University and were frozen for storage.
Five incubation factors were used to create 20 incubation trials using a ship-deck light-filtering incubator to mimic at-depth light filtration, cooled with a continuous flow of ambient surface seawater and stored in translucent and amber Nalgene bottles for dark incubations: each done in triplicate. Factors included: 1) filtering of samples through a 0.2µm syringe filter, meant as a control to screen filtered seawater of bacteria and macro-organisms and particles, kept in either the light or the dark depending on incubation, (Campos et al., 1996, Farrenkoph et al., 1997, Hardisty et al., 2020); 2) addition of O2− dismutase (SOD) to incubations both filtered and unfiltered, but all left in the dark, intended as a control to remove ambient O2− in seawater (Sutherland et al., 2020, Li et al., 2012, Diaz et al., 2013); 3) addition of superoxide thermal source (SOTS) and hydrogen peroxide (H2O2) to filtered samples kept in the dark in separate experiments, both suspected of being able to aid in oxidation of I- to IO3- in seawater, 4) unfiltered water in the dark to determine the role, if any, of photochemical reactions that may cause the reduction of IO3- to I- in the presence of organic matter (Chance et al., 2014, Spokes and Liss 1996); five additions of MnCl2 to iterations of the above in order to consider the potential of preferential Mn2+ oxidation relative to I-. Note that controls 2 and 5 were only relevant if I- oxidation was detected in the other controls.
Seawater for samples was taken from both photic (1m) and subphotic (240m) depths and collected in carboys. Superoxide thermal source was kept frozen (-80⁰C) until it was added by pipette to two of the incubations (11 and 19) as a combination of 1ml dimethyl sulfoxide (DMSO) + 1mg SOTS (3027.55µM SOTS) (Cayman Chemicals, CAS number 223507-96-8) at a volume targeting 10 nM O2− (Heller and Croot, 2010). This was made fresh daily immediately before adding to samples and added daily to account for natural decay. The O2− concentration of the SOTS stock was not analyzed but O2− concentration was analyzed in one experiment a few hours post-SOTS addition – to allow to reach steady state concentrations – to confirm O2− accumulation near target levels. Hydrogen peroxide (30%) was added at a volume targeting 50nM H2O2 in each solution. SOD was added by pipette daily – thus accounting for decay and titration via potentially newly formed O2− within the incubations – from a stock volume of 4kU/ml to incubations to produce samples with SOD volume of 0.32kU/ml. Given potential long oxidation timescales of I-, all incubations were performed over a 140-hour time period, with subsamples collected for iodine species measurement at t0, ~t40, ~t88, and ~t140 hours.
The steady-state concentration of O2− was determined as previously described with some minor modifications (Sutherland et al., 2020). Water samples were collected using 12L Ocean Test Equipment bottles on a 24-position Sea-Bird CTD rosette. Samples were transferred into dark, acid washed bottles and measured between 30 mins and six hours of the collection time. Thirty minutes was chosen as a sample delay period because it is greater than 10 half-lives of O2− in typical marine waters, meaning that any O2− remaining is the result of light-independent O2− production by microbial communities in the bottles (Roe et al., 2016). Samples collected above the thermocline were incubated on deck with continuously flowing surface water and samples below the thermocline were incubated at 4°C. Superoxide concentrations were measured using an FeLume Mini (Waterville Analytical) and the O2−-specific chemiluminescent probe methyl cypridina luciferin analog (MCLA, Santa Cruz Biotechnology, Rose et al. 2008). Recent work using these methods has demonstrated that filtration of natural seawater can produce additional O2− (Roe et al. 2016). To avoid introducing this bias into sample measurements, we used the following equation: [O2−]sample=[O2−]USW - [O2−]AFSW, where [O2−]USW represents the measured concentration of O2− in unfiltered seawater (USW) and [O2−]AFSW represents the concentration of O2− in aged (>24 hours) filtered (0.2µm Sterivex filter) seawater (AFSW) amended with 75µM diethylene-triaminepentaacetic acid (DTPA) to complex any metals present in the sample. Each measurement consisted of running a 25mL USW sample through the FeLume system (3mL/min) for several minutes until a steady signal was recorded. After a steady signal was recorded, 2μL superoxide dismutase (SOD; Superoxide Dismutase from bovine erythrocytes >3,000 U mg-1, Sigma, stock prepared in DI water to 4,000 U/mL) was added to the sample to quench all O2− in the sample. The same procedure was followed for the AFSW samples. The reported O2− concentrations represent the difference between the USW and the AFSW concentrations, the latter allowing us to eliminate the portion of the measured signal due to MCLA auto-oxidation in each particular sample matrix. Calibration curves were generated daily from three or more paired observations of time-zero O2− concentration (dependent variable) and extrapolated chemiluminescence (independent variable) using linear regression. Because chemiluminescence values were baseline-corrected, regression lines were forced through the origin. Calibrations yielded highly linear curves (typically R2 >0.9), with a typical sensitivity of one chemiluminescence unit per pM O2−.
The concentrations of IO3- and I- from the incubations were determined at MSU after sample collection via the methods outlined by Jickells (1988) for spectrophotometry (IO3-) and by Hardisty et al., (2020) for ion exchange chromatography (I-, DOI) and ICP-MS.
See the related dataset "BATS/Hydrostation S: Iodine speciation and isotope ratio values" (https://www.bco-dmo.org/dataset/914915) for details of the iodine isotope ratio methodology.
Hardisty, D., Sutherland, K. (2023) Spectrophotometer absorbance for incubations from iodine radiotracer incubation experiments conducted on the R/V Atlantic Explorer cruise AE1825 with samples collected at BATS and Hydrostation S in September of 2018. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2023-11-14 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/914962 [access date]
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