| Symbiont titers in Bugula neritina colonies grown under different conditions | Ratio symb/host gene copy number colonies grown at 16°C, no predators, after 18 weeks
| Cont_18w_16 |
| Symbiont titers in Bugula neritina colonies grown under different conditions | Ratio symb/host gene copy number colonies grown at 22°C, no predators, after 18 weeks
| Cont_18w_22 |
| Symbiont titers in Bugula neritina colonies grown under different conditions | Ratio symb/host gene copy number colonies grown at 16°C, no predators, after 23 weeks
| Cont_23w_16 |
| Symbiont titers in Bugula neritina colonies grown under different conditions | Ratio symb/host gene copy number colonies grown at 22°C, no predators, after 23 weeks
| Cont_23w_22 |
| Symbiont titers in Bugula neritina colonies grown under different conditions | Ratio of symbiont gene copy number to host gene copy number of parent
| Parent |
| Symbiont titers in Bugula neritina colonies grown under different conditions | Ratio symb/host gene copy number colonies grown at 16°C, with predators, after 18 weeks
| Pred_18w_16 |
| Symbiont titers in Bugula neritina colonies grown under different conditions | Ratio symb/host gene copy number colonies grown at 22°C, with predators, after 18 weeks
| Pred_18w_22 |
| Symbiont titers in Bugula neritina colonies grown under different conditions | Ratio symb/host gene copy number colonies grown at 16°C, with predators, after 23 weeks
| Pred_23w_16 |
| Symbiont titers in Bugula neritina colonies grown under different conditions | Ratio symb/host gene copy number colonies grown at 22°C, with predators, after 23 weeks
| Pred_23w_22 |
| Microbial gene abundance of coastal wetland soil cores collected in June 2018 from Barataria Bay, Louisiana | Abundance of Arch gene within a given subsample of soil
| Archaea |
| Microbial gene abundance of coastal wetland soil cores collected in June 2018 from Barataria Bay, Louisiana | Abundance of 16S gene within a given subsample of soil
| Bacteria |
| Microbial gene abundance of coastal wetland soil cores collected in June 2018 from Barataria Bay, Louisiana | Abundance of dsrA gene within a given subsample of soil
| dsrA |
| Number of gene markers identified in sediment in samples from Little Lagoon, Alabama collected from 2012-2013. | Number of gene markers identified in sediment at the site East; location of site is 30.253347, -87.724729
| East |
| Number of gene markers identified in sediment in samples from Little Lagoon, Alabama collected from 2012-2013. | Standard error for gene markers identified in sediment
| East_SE |
| Number of gene markers identified in sediment in samples from Little Lagoon, Alabama collected from 2012-2013. | Number of gene markers identified in sediment at the site Mouth; location of site is 30.243683, -87.738407
| Mouth |
| Number of gene markers identified in sediment in samples from Little Lagoon, Alabama collected from 2012-2013. | Standard error for gene markers identified in sediment
| Mouth_SE |
| Number of gene markers identified in sediment in samples from Little Lagoon, Alabama collected from 2012-2013. | Number of gene markers identified in sediment at the site West; location of site is 30.247181, -87.767856
| West |
| Number of gene markers identified in sediment in samples from Little Lagoon, Alabama collected from 2012-2013. | Standard error for gene markers identified in sediment
| West_SE |
| Pooled sequencing data of field-collected Eurytemora affinis copepods from nine locations in North America collected October 2012 to March 2014 | Total sequenced DNA bases
| Bases |
| Results of qPCR assessments of the abundance of genes related to nitrification, and measurements of ammonia, urea, nitrite and polyamine concentrations in samples collected on cruise LMG1801 on R/V Laurence M. Gould from January to February 2018 | Concentration of ammonia monooxygenase subunit A genes from Beta-proteobacteria determined by qPCR in units of 103 copies L-1. "nd" = no data. Limit of detection estimated from volume filtered, DNA extract volume, template volume used per reaction and standard curves is 8 * 103 copies L-1, values | AOB_amoA |
| Results of qPCR assessments of the abundance of genes related to nitrification, and measurements of ammonia, urea, nitrite and polyamine concentrations in samples collected on cruise LMG1801 on R/V Laurence M. Gould from January to February 2018 | Concentration of Bacteria 16S rRNA genes determined by qPCR in units of 106 copies L-1. "nd" = no data. Limit of detection estimated from volume filtered, DNA extract volume, template volume used per reaction and standard curves is 5 * 106 copies L-1, values | bact16S |
| Results of qPCR assessments of the abundance of genes related to nitrification, and measurements of ammonia, urea, nitrite and polyamine concentrations in samples collected on cruise LMG1801 on R/V Laurence M. Gould from January to February 2018 | Concentration of Nitrospina 16S rRNA genes determined by qPCR in units of 103 copies L-1. "nd" = no data. Limit of detection estimated from volume filtered, DNA extract volume, template volume used per reaction and standard curves is 2 * 103 copies L-1, values | NOB_16S_rRNA |
| Results of qPCR assessments of the abundance of genes related to nitrification, and measurements of ammonia, urea, nitrite and polyamine concentrations in samples collected on cruise LMG1801 on R/V Laurence M. Gould from January to February 2018 | Concentration of Thaumarchaeota urease subunit C genes determined by qPCR in units of 103 copies L-1. "nd" = no data. Limit of detection estimated from volume filtered, DNA extract volume, template volume used per reaction and standard curves is 8 * 103 copies L-1, values | Thaumarchaeota_ureC |
| Results of qPCR assessments of the abundance of genes related to nitrification, and measurements of ammonia, urea, nitrite and polyamine concentrations in samples collected on cruise LMG1801 on R/V Laurence M. Gould from January to February 2018 | Concentration of Marine Group 1 Archaea (Thaumarchaeota) 16S rRNA genes determined by qPCR in units of 103 copies L-1. "nd" = no data. Limit of detection estimated from volume filtered, DNA extract volume, template volume used per reaction and standard curves is 2 * 103 copies L-1, values | Thaum_16S |
| Results of qPCR assessments of the abundance of genes related to nitrification, and measurements of ammonia, urea, nitrite and polyamine concentrations in samples collected on cruise LMG1801 on R/V Laurence M. Gould from January to February 2018 | Concentration of ammonia monooxygenase subunit A genes from the Water Column clade A Thaumarchaeota determined by qPCR in units of 103 copies L-1."nd" = no data. Limit of detection estimated from volume filtered, DNA extract volume, template volume used per reaction and standard curves is 1 * 103 copies L-1, values | WCA_amoA |
| Results of qPCR assessments of the abundance of genes related to nitrification, and measurements of ammonia, urea, nitrite and polyamine concentrations in samples collected on cruise LMG1801 on R/V Laurence M. Gould from January to February 2018 | Concentration of ammonia monooxygenase subunit A genes from the Water Column clade B Thaumarchaeota determined by qPCR in units of 103 copies L-1. "nd" = no data. Limit of detection estimated from volume filtered, DNA extract volume, template volume used per reaction and standard curves is 1 * 103 copies L-1, values | WCB_amoA |
| Quantitative PCR data from samples collected on the R/V Sarmiento de Gamboa cruise in the subtropical North Atlantic Ocean between January and March 2011 (Microbial associations in zooplankton project) | Gamma 24774A11 gene copy concentration
| Gamma_24774A11 |
| Quantitative PCR data from samples collected on the R/V Sarmiento de Gamboa cruise in the subtropical North Atlantic Ocean between January and March 2011 (Microbial associations in zooplankton project) | Group B gene copy concentration
| group_B |
| Quantitative PCR data from samples collected on the R/V Sarmiento de Gamboa cruise in the subtropical North Atlantic Ocean between January and March 2011 (Microbial associations in zooplankton project) | Het1 gene copy concentration
| Het1 |
| Quantitative PCR data from samples collected on the R/V Sarmiento de Gamboa cruise in the subtropical North Atlantic Ocean between January and March 2011 (Microbial associations in zooplankton project) | Tricho gene copy concentration
| Tricho |
| Quantitative PCR data from samples collected on the R/V Sarmiento de Gamboa cruise in the subtropical North Atlantic Ocean between January and March 2011 (Microbial associations in zooplankton project) | UCYN-A gene copy concentration
| UCYN_A |
| Hydrological, biogeochemcial and N2-fixer qPCR-derived abundance data for May 2017 (SP1714) and October (SP1724) SCCS cruises. | Average of γ-24774A11 gene expression
| g_24774A11_ave |
| Hydrological, biogeochemcial and N2-fixer qPCR-derived abundance data for May 2017 (SP1714) and October (SP1724) SCCS cruises. | Standard deviation of γ-24774A11 gene expression
| g_24774A11_stdev |
| Hydrological, biogeochemcial and N2-fixer qPCR-derived abundance data for May 2017 (SP1714) and October (SP1724) SCCS cruises. | Average of UCYN-A1 gene expression
| Het_2_ave |
| Hydrological, biogeochemcial and N2-fixer qPCR-derived abundance data for May 2017 (SP1714) and October (SP1724) SCCS cruises. | Standard deviation of UCYN-A1 gene expression
| Het_2_stdev |
| Hydrological, biogeochemcial and N2-fixer qPCR-derived abundance data for May 2017 (SP1714) and October (SP1724) SCCS cruises. | Average of UCYN-A1 gene expression
| Tricho_ave |
| Hydrological, biogeochemcial and N2-fixer qPCR-derived abundance data for May 2017 (SP1714) and October (SP1724) SCCS cruises. | Standard deviation of UCYN-A1 gene expression
| Tricho_stdev |
| Hydrological, biogeochemcial and N2-fixer qPCR-derived abundance data for May 2017 (SP1714) and October (SP1724) SCCS cruises. | Average of UCYN-A1 gene expression
| UCYN_A1_ave |
| Hydrological, biogeochemcial and N2-fixer qPCR-derived abundance data for May 2017 (SP1714) and October (SP1724) SCCS cruises. | Standard deviation of UCYN-A1 gene expression
| UCYN_A1_stdev |
| Hydrological, biogeochemcial and N2-fixer qPCR-derived abundance data for May 2017 (SP1714) and October (SP1724) SCCS cruises. | Average of UCYN-A2 gene expression
| UCYN_A2_ave |
| Hydrological, biogeochemcial and N2-fixer qPCR-derived abundance data for May 2017 (SP1714) and October (SP1724) SCCS cruises. | Standard deviation of UCYN-A2 gene expression
| UCYN_A2_stdev |
| Hydrological, biogeochemcial and N2-fixer qPCR-derived abundance data for May 2017 (SP1714) and October (SP1724) SCCS cruises. | Average of UCYN-B gene expression
| UCYN_B_ave |
| Hydrological, biogeochemcial and N2-fixer qPCR-derived abundance data for May 2017 (SP1714) and October (SP1724) SCCS cruises. | Standard deviation of UCYN-B gene expression
| UCYN_B_stdev |
| Gene copy number counts and 16S analyses of July 2019 Rhode River surface water incubated with or without viral dilution | 16S qPCR Gene Copy Number Mean
| Genes_16S |
| Gene copy number counts and 16S analyses of July 2019 Rhode River surface water incubated with or without viral dilution | RNR qPCR Gene Copy Number Mean
| RNR_Genes |
| Water quality data, gene copy number counts, and 16S analyses from Rhode River samples collected at SERC during 2017 and 2018 | 16S qPCR Gene Copy Number Mean
| Genes_16S_1 |
| Water quality data, gene copy number counts, and 16S analyses from Rhode River samples collected at SERC during 2017 and 2018 | 16S qPCR Gene Copy Number Standard Error
| Genes_16S_2 |
| Water quality data, gene copy number counts, and 16S analyses from Rhode River samples collected at SERC during 2017 and 2018 | RNR qPCR Gene Copy Number Mean
| RNR_Genes_1 |
| Water quality data, gene copy number counts, and 16S analyses from Rhode River samples collected at SERC during 2017 and 2018 | RNR qPCR Gene Copy Number Standard Error
| RNR_Genes_2 |
| Environmental data, nitrifier abundance, ammonia oxidation rates from six from R/V Savannah cruises in the South Atlantic Bight in 2014 (GCE-LTER) | Concentration of genes for Archaeal ammonia monooxygenase subunit A determined by qPCR
| arch_amoA |
©2020 Biological and Chemical Oceanography Data Management Office.