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Parameter: cont_vocab_term

Short Description: controlled vocabulary term

Short Name: cont_vocab_term

Official Name: cont_vocab_term

External Identifier: skos:closeMatch: https://vocab.nerc.ac.uk/collection/S06/current/S0600159/

Description

A vocabulary term that has a registered name in an existing controlled vocabulary (i.e. ENVO, Gene Ontology, other). May be used if multiple terms exist for a single parameter.

Parameter Occurences in Datasets (8)

Dataset	PI-Supplied Description	PI-Supplied Name
Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019	KEGG identification based on the cross-reference of protein annotation and the Kyoto Encyclopedia of Genes and Genomes database, #N/A = no hit	Cross_reference_KEGG
Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019	Uniprot entry name for the top hit, #N/A = no hit	Entry_name
Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019	Gene name based on the reference genome of the top hit, #N/A = no hit	Gene_names
Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019	Gene ontology terms and descriptions associated with Biological Process, #N/A = no hit	Gene_ontology_biological_process
Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019	Gene ontology terms and descriptions associated with Cellular Component, #N/A = no hit	Gene_ontology_cellular_component
Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019	Identification of GO term with a functional description, #N/A = no hit	Gene_ontology_GO
Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019	GO terms based on cross-reference of protein annotation to the Gene Ontology Resource for functional identification as to Biological Process (BP), Cellular Component (CC) and Molecular Function (MF), proteins are typically involved in multiple processes, #N/A = no hit	Gene_ontology_IDs
Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019	Gene ontology terms and descriptions associated with Molecular Function, #N/A = no hit	Gene_ontology_molecular_function