Extracted from the NSF award abstract:
This collaborative project by Duke University and Georgia Institute of Technology researchers will combine oceanographic and advanced molecular techniques to characterize the adaptive responses of microbial communities to multiple stressors associated with OA. In particular, microbial communities from estuarine and coastal ecosystems as well as open ocean waters will be incubated under conditions of increased acidity or temperature or both, and their activities will be measured and quantified.
Preliminary data from time-series observations of a coastal temperate estuary shows that pH, temperature and other stressors vary over multiple space and time scales, and this variability is relatively higher than that observed in open ocean waters. Based on this evidence, the guiding hypothesis of this work is that microbes in coastal ecosystems are better adapted to ocean acidification as well as multiple stressors compared to similar microbes from the open ocean. To quantify the adaptive genetic, physiological and biogeochemical responses of microbes to OA, the team's specific goals are to: (1) characterize complex natural microbial community responses to multiple stressors using factorial mesocosm manipulations, (2) assemble a detailed view of genomic and physiological (including transcriptional) adaptations to OA at the single species level using cultured model marine microbes (e.g. Prochlorococcus, Synechococcus, Vibrio) identified as responsive to stressors in whole community mesocosm experiments, and (3) assess the power of model microbial strains and mesocosm experiments to predict microbial community responses to natural OA variability in a temporally dynamic, temperate estuary and along a trophic/pH gradient from the Neuse-Pamlico Sound to the Sargasso Sea. By comparing an estuarine ecosystem to its open ocean counterpart, this study will assess the sensitivity of microbial structure and function in response to ocean acidification.
This project is associated with Pivers Island Coastal Observatory.
Dataset | Latest Version Date | Current State |
---|---|---|
Accession numbers from acidification mesocosms and original in situ samples from coastal and offshore water station at the Pivers Island Coastal Observatory January to February 2017 | 2019-04-24 | Preliminary and in progress |
16S rRNA gene NCBI ID numbers from the PICO project | 2017-06-13 | Final no updates expected |
Environmental and physical data associated with ocean acidification microbe adaptation from 2012-2014 | 2017-05-25 | Final no updates expected |
Principal Investigator: Zackary I. Johnson
Duke University
Principal Investigator: Kostas Konstantinidis
Georgia Institute of Technology (GA Tech)
Co-Principal Investigator: Dana Hunt
Duke University
Contact: Zackary I. Johnson
Duke University
DMP_Johnson_OCE-1416665.pdf (76.06 KB)
10/21/2014