Project | Data Management Plan |
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Adaptation of key N2-fixing cyanobacteria to changing CO2 | Hutchins_et_al_DMP_OCE-1260490_1260233.pdf (156.42 KB) |
Principal Investigator: David A. Hutchins (University of Southern California)
Co-Principal Investigator: Eric A Webb
Co-Principal Investigator: Feixue Fu
Nature Geoscience~2013~6~Hutchins, D.A., Fu F.X., Webb E.A., Walworth N., and Tagliabue, A.~doi: 10.1038/ngeo1858~790~~~~Taxon-specific response of marine nitrogen fixers to elevated carbon dioxide concentrations.~~~~~~~
Nature Geoscience~2013~6~Capone D.G. and Hutchins D.A.~doi:10.1038/ngeo1916~711~~~~The microbial biogeochemistry of coastal upwelling regimes in a changing ocean.~~~~~~~
Photosynthesis Research~2014~~Cai, X., Gao, K., Fu, F.-X., Campbell, D.A., Beardall, J., and Hutchins, D.A.~~~~~~Electron transport kinetics in the diazotrophic cyanobacterium Trichodesmium spp. grown across a range of light levels.~~~~~~~
Aquatic Microbial Ecology~2014~72~Fu, F.-X., Yu, E., Garcia, N.S., Gale, J., Luo, Y., Webb, E.A. and Hutchins, D.A.~~33~~~~Differing responses of marine N2-fixers to warming and consequences for future diazotroph community structure.~~~~~~~
PLoS One:~2014~~Garcia, N.S. and Hutchins, D.A.~DOI:10.1371/journal.pone.0114465~~~~~Light-limited growth rate modulates nitrate inhibition of dinitrogen fixation in the marine unicellular cyanobacterium Crocosphaera watsonii~~~~~~~
Nature Geoscience~2013~6~Hutchins, D.A., Fu F.X., Webb E.A., Walworth N., and Tagliabue, A.~doi: 10.1038/ngeo1858~730~~~~Taxon-specific response of marine nitrogen fixers to elevated carbon dioxide concentrations.~~~~~~~
International Society of Microbial Ecology journal (ISME Journal)~2015~9~Nathan S. García, Feixue Fu, Peter N. Sedwick, David A. Hutchins~doi:10.1038/ismej.2014.104~238~~~~Iron deficiency increases growth and nitrogen fixation rates of phosphorus-deficient marine cyanobacteria.~~~~~~~
Marine Ecology Progress Series~2014~515~Xu, J., Gao, K., Li, Y. and Hutchins, D.A.~doi:10.3354/meps11026~73~~~~Multiple future ocean changes interactively alter physiological and biochemical processes of diatoms.~~~~~~~
PLOS One~2015~10~Bermúdez, R., Feng, Y., Roleda, M.Y., Tatters, A.O., Hutchins, D.A., Larsen, T., Boyd, P.W., Hurd, C.L., Riebesell, U., Winder, M.~doi:10.1371/journal.pone.0123945~e012394~~~~Long-term conditioning to elevated pCO2 and warming influences the fatty and amino acid composition of the diatom Cylindrotheca fusiformis.~~~~~~2016-02-29 19:45:08.373~
Nature Geoscience~2013~6~Capone D.G. and Hutchins D.A.~doi:10.1038/ngeo1916~711~~~~The microbial biogeochemistry of coastal upwelling regimes in a changing ocean.~~~~~~2016-02-29 19:45:08.386~
Aquatic Microbial Ecology~2014~72~Fu, F.-X., Yu, E., Garcia, N.S., Gale, J., Luo, Y., Webb, E.A. and Hutchins, D.A.~~33~~~~Differing responses of marine N2-fixers to warming and consequences for future diazotroph community structure.~~~~~~2016-02-29 19:45:08.390~
PLoS One~2014~~Garcia, N.S. and Hutchins, D.A.~DOI:10.1371/journal.pone.0114465~~~~~Light-limited growth rate modulates nitrate inhibition of dinitrogen fixation in the marine unicellular cyanobacterium Crocosphaera watsonii~~~~~~2016-02-29 19:45:08.396~
ISME Journal~2015~9~Garcia, N.S., Fu, F.-X., Sedwick, P.N., and Hutchins, D.A.~doi:10.1038/ismej.2014.104~238~~~~Iron deficiency increases growth and nitrogen fixation rates of phosphorus-deficient marine cyanobacteria.~~~~~~2016-02-29 19:45:08.400~
Nature Communications~2015~6~Hutchins, D. A., Walworth, N., Webb, E.A., Saito, M. A., Moran, D., McIlvin, M. R., Gale, J., Johnson, C., and Fu, F.-X.~doi:10.1038/ncomms9155~8155~~~~Irreversibly increased N2 fixation in Trichodesmium experimentally adapted to high CO2~~~~~~2016-02-29 19:45:08.403~
Nature Geoscience~2013~6~Hutchins, D.A., Fu F.X., Webb E.A., Walworth N., and Tagliabue, A.~doi: 10.1038/ngeo1858~790~~~~Taxon-specific response of marine nitrogen fixers to elevated carbon dioxide concentrations.~~~~~~2016-02-29 19:45:08.406~
The ISME Journal~2015~online~LM Momper, BK Reese, G Carvalho, P Lee and EA Webb~10.1038/ismej.2014.186~~~~~A novel cohabitation between two diazotrophic cyanobacteria in the oligotrophic ocean~~~~~~2016-02-29 19:45:08.413~
Proceedings of the National Academy of Sciences USA.~2015~112~Walworth, N.G., Pfreundt, U., Nelson, W.C., Mincer, T., Heidelberg, J.F., Fu, F.-X., Waterbury, J.B., Glavina del Rio, T., Goodwin, L., Kyrpides, N., Land, M., Tanja, W., Hutchins, D.A., Hess, W.R. and Webb, E.A.~doi: 10.1073/pnas.1422332112~4251~~~~Trichodesmium genome maintains abundant, widespread noncoding DNA in situ despite oligotrophic lifestyle.~~~~~~2016-02-29 19:45:08.423~
Nature Climate Change~2016~6~Hutchins, D.A. and Boyd, P.W.~~1071~~~~Marine phytoplankton and the changing ocean iron cycle.~~~~~~2017-03-16 21:13:47.233~
Nature Communications~2016~~N.G. Walworth, F.-X. Fu, E.A. Webb, M.A. Saito, D. Moran, M.R. Mcllvin, M.D. Lee, and D.A. Hutchins~~~~~~Mechanisms of increased Trichodesmium fitness under iron and phosphorus co-limitation in the present and future ocean~~~~~~2017-03-16 21:13:47.270~
Limnology and Oceanography~2016~61~Tong, S., Hutchins, D.A., Fu, F.X., and Gao, K.~~2234~~~~Effects of varying growth irradiance and nitrogen sources on calcification and physiological performance of the coccolithophore Gephyrocapsa oceanica grown under nitrogen limitation.~~~~~~2017-03-16 21:13:47.283~
Proceedings of National Academy of Sciences USA~2016~~Walworth, N.G., Lee, M.D., Fu, F.-X., Hutchins, D.A. and Webb, E.A.~doi/10.1073/pnas.1605202113~E7367~~~~Molecular and physiological evidence of genetic assimilation to high CO2 in the marine nitrogen fixer Trichodesmium.~~~~~~2017-03-16 21:13:47.310~
Organic Letters~2017~~Aihara, K., Inokuma, T., Jichu, T., Lin, Z., Fu, F.-X., Yamaoka, K., Shigenaga, A., Hutchins, D.A., Schmidt, E, and Otaka, A.~~~~~~Cysteine-free intramolecular ligation of N-Sulfanylethylanilide peptide using 4-mercaptobenzylphosphonic acid: Synthesis of cyclic peptide, trichamide.~~~~~~2018-05-25 14:15:16.176~
Biogeosciences~2017~~Cai, X., Hutchins, D.A., Fu, F.-X. and Gao, K.~~~~~~Effects of ultraviolet radiation on photosynthetic performance and N2 fixation in Trichodesmium erythraeum IMS 101~~~~~~2018-05-25 14:15:16.213~
Nature Microbiology~2017~~Hutchins, D.A. and Fu, F.X.~~~~~~Microorganisms and ocean global change~~~~~~2018-05-25 14:15:16.223~
Science~2017~357~Hutchins, D.A., Fu, F.-X., Walworth, N.G., Lee, M.D., Saito, M.A. and Webb, E.A.~DOI: 10.1126/science.aao0067~eaao006~~~~Comment on ?The complex effects of ocean acidification on the prominent N2-fixing cyanobacterium Trichodesmium?~~~~~~2018-05-25 14:15:16.226~
Applied and Environmental Microbiology~2018~~Lee M.D., Webb E.A., Walworth N.G., Fu F.-X., Held N.A., Saito M.A., Hutchins DA~doi.org/10.1128/AEM.02026-17~e02026-17~~~~Transcriptional activities of the microbial consortium living with the marine nitrogen fixing cyanobacterium Trichodesmium reveal potential roles in community-level nitrogen cycling.~~~~~~2018-05-25 14:15:16.233~
ISME Journal.~2017~~Lee, M.D., Walworth, N.G., McParland, E.L., Fu, F.X., Mincer, T.J., Levine, N.M., Hutchins, D.A. and Webb, E.A.~~~~~~The Trichodesmium consortium: conserved heterotrophic co-occurrence and genomic signatures of potential interactions~~~~~~2018-05-25 14:15:16.240~
Biogeosciences~2018~15~Lin, X., Huang, R., Li, Y., Wu, Y., Hutchins, D.A., Dai, M. and Gao, K.~doi.org/10.5194/bg-15-551-2018~551~~~~Interactive network configuration maintains bacterioplankton community structure under elevated CO2 in a eutrophic coastal mesocosm experiment.~~~~~~2018-05-25 14:15:16.243~
Global Change Biology~2018~00~Tong, S., Gao, K. and Hutchins, D.A.~DOI: 10.1111/gcb.14065~1~~~~Adaptive evolution in the coccolithophore Gephyrocapsa oceanica following 1000 generations of selection under elevated CO2.~~~~~~2018-05-25 14:15:16.250~
Applied and Environmental Microbiology~2018~84~Walworth, N.G., Fu, F.-X., Lee, M.D., Cai, X., Saito, M.A., Webb, E.A., and Hutchins, D.A.~doi .org/10.1128/AEM.02137-17~e02137-17~~~~Nutrient co-limited Trichodesmium as nitrogen source or sink in a future ocean.~~~~~~2018-05-25 14:15:16.253~
Environmental Microbiology~2017~19~Walworth, N.G., Hutchins, D.A., Dolzhenko, E., Lee, M.D., Fu, F.-X., Smith, A.D., and Webb, E.A.~doi:10.1111/1462-2920.13934~4700~~~~Biogeographic conservation of the cytosine epigenome in the globally important marine, nitrogen-fixing cyanobacterium Trichodesmium~~~~~~2018-05-25 14:15:16.256~
Frontiers in Microbiology~2018~9~Walworth, N.G., Lee, M.D., Suffridge, C., Qu, P.-P., Fu, F.-X., Saito, M.A., Webb, E.A., Sañudo-Wilhelmy, S.A., and Hutchins, D.A.~doi: 10.3389/fmicb.2018.00189~189~~~~Functional genomics and phylogenetic evidence suggest genus-wide cobalamin production by the globally distributed marine nitrogen fixer Trichodesmium.~~~~~~2018-05-25 14:15:16.263~
Global Change Biology~2018~24~Tong, Shanying and Gao, Kunshan and Hutchins, David A.~10.1111/gcb.14065~~~~~Adaptive evolution in the coccolithophore <i>Gephyrocapsa oceanica</i> following 1,000 generations of selection under elevated CO <sub>2</sub>~N~p. 3055-3064~10050446~10053328~OSTI~2018-01-30 17:02:37.433~
Limnology and Oceanography~2018~63~Qu, Pingping and Fu, Feixue and Hutchins, David A.~10.1002/lno.10781~~~~~Responses of the large centric diatom <i>Coscinodiscus</i> sp. to interactions between warming, elevated CO <sub>2</sub> , and nitrate availability: Diatom responses to climate changes~N~1407 to 1424~10050445~10050408~OSTI~2018-01-30 17:02:37.550~
Applied and Environmental Microbiology~2017~84~Lee, Michael D. and Webb, Eric A. and Walworth, Nathan G. and Fu, Fei-Xue and Held, Noelle A. and Saito, Mak A. and Hutchins, David A. and Drake, Harold L.~10.1128/AEM.02026-17~~~~~Transcriptional Activities of the Microbial Consortium Living with the Marine Nitrogen-Fixing Cyanobacterium Trichodesmium Reveal Potential Roles in Community-Level Nitrogen Cycling~N~e02026-17~10049728~10049728~OSTI~2018-01-17 01:02:34.170~
Science~2017~357~Hutchins, David A. and Fu, Feixue and Walworth, Nathan G. and Lee, Michael D. and Saito, Mak A. and Webb, Eric A.~10.1126/science.aao0067~~~~~Comment on ?The complex effects of ocean acidification on the prominent N <sub>2</sub> -fixing cyanobacterium <i>Trichodesmium</i> ?~N~eaao0067~10049733~10041606~OSTI~2018-01-17 05:02:04.960~
Nature Microbiology~2017~2~Hutchins, David A. and Fu, Feixue~10.1038/nmicrobiol.2017.58~~~~~Microorganisms and ocean global change~N~17058~10049694~10049694~OSTI~2018-01-17 05:02:05.260~
Applied and Environmental Microbiology~2018~84~Walworth, Nathan G. and Fu, Fei-Xue and Lee, Michael D. and Cai, Xiaoni and Saito, Mak A. and Webb, Eric A. and Hutchins, David A. and Liu, Shuang-Jiang~10.1128/AEM.02137-17~~~~~Nutrient-Colimited <i>Trichodesmium</i> as a Nitrogen Source or Sink in a Future Ocean~N~e02137-17~10049810~10049810~OSTI~2018-01-18 13:02:10.293~
Molecular Biology and Evolution~2020~~Walworth, Nathan G and Lee, Michael D and Dolzhenko, Egor and Fu, Fei-Xue and Smith, Andrew D and Webb, Eric A and Hutchins, David A~https://doi.org/10.1093/molbev/msaa256~~~~~Long-Term m5C Methylome Dynamics Parallel Phenotypic Adaptation in the Cyanobacterium <i>Trichodesmium</i>~N~~10212746~10212746~OSTI~2021-02-04 17:01:47.170~