Assembled metagenome sequences collected on the R/V Melville (MGLN10MV) and R/V Atlantis (Alvin AT11-07) cruises in the Loihi Seamount, Hawaiian archipelago and East Pacific Rise from 2011-2013 (EPR and Loihi basalt genomes project) | 2016-01-14 | Final no updates expected |
Sub-seafloor metatranscriptomes from anaerobic Peru Margin sediments collected on R/V JOIDES Resolution Leg 201 in 2002 | 2015-11-05 | Final no updates expected |
Sub-seafloor sediment eukaryotic rRNA collected on R/V JOIDES Resolution Legs 201 and 204, R/V Maria Merian cruise MSM11-1 at North Pond, and R/V Meteor cruise M76-1a at the Benguela Upwelling System from 2002-2009 | 2015-11-06 | Final no updates expected |
Accession numbers for raw sequence reads; samples collected on R/V Roger Revelle cruise KNOX02RR in the South Pacific Gyre from 2006-2007 (Microbial Diversity SPG project) | 2015-11-10 | Final no updates expected |
Elemental composition for 16S rRNA gene amplicon and metagenomic sequences collected on the R/V JOIDES Resolution (JRES-204) cruise in the Cascadia Continental Margin during 2002 (Methane-Hydrate Sediment Omics project) | 2015-12-02 | Final no updates expected |
NCBI accession numbers for metagenomic sequences collected from the R/V JOIDES Resolution (JRES-204) cruise in the Cascadia Continental Margin during 2002 (Methane-Hydrate Sediment Omics project) | 2015-12-02 | Final no updates expected |
16S rRNA gene amplicon sequence accessions collected from the R/V JOIDES Resolution (JRES-204) cruise in the Cascadia Continental Margin during 2002 (Methane-Hydrate Sediment Omics project) | 2015-12-02 | Final no updates expected |
Iberian Margin Anaerobic Sediment 18S rRNA amplicons from R/V JOIDES Resolution cruise JRES-339 in the West Iberian margin from 2011-2012 (Subseafloor Microbial Ecology project) | 2015-12-02 | Final no updates expected |
Iberian Margin Anaerobic Sediment Metagenomes from R/V JOIDES Resolution cruise JRES-339 in the West Iberian margin from 2011-2012 (Subseafloor Microbial Ecology project) | 2015-12-02 | Final no updates expected |
Metagenomes from Delaware estuarine riverbank sediments obtained by push corer in July 2012 | 2015-12-04 | Final no updates expected |
Microbial cell counts derived from the formation fluids recovered from the CORKs installed at North Pond; collected on Maria S. Merian cruises MSM20-5 and MSM37 from 2012-2014 (North Pond Microbes project) | 2015-12-29 | Final no updates expected |
Net oxygen consumption rates of the fluids recovered from the CORKs installed at North Pond; collected on Maria S. Merian cruise MSM37 in 2014 | 2015-12-29 | Final no updates expected |
Particulate organic carbon from the formation fluids recovered from the CORKs installed at North Pond; collected on Maria S. Merian cruise MSM20-5 in 2012 | 2015-12-30 | Final no updates expected |
Dissolved organic carbon and total dissolved nitrogen from the formation fluids recovered from the CORKs installed at the North Pond; collected on Maria S. Merian cruise MSM20-5 in 2012 | 2015-12-30 | Final no updates expected |
Raw LC-MS/MS data with list of identified peptides in xml format from a proteomic analysis performed on protein extracts of M. ferrooxydans | 2016-01-27 | Final no updates expected |
Raw LC-MS/MS data, with list of identified peptides, and DNA sequences from a proteomic profile of Mariprofundus ferrooxydans | 2016-01-28 | Final no updates expected |
16S rRNA Sequences from cathode-oxidizing lithoprophic isolates (COLI) from Catalina Harbor Marine sediments | 2016-01-28 | Final no updates expected |
454 pyrotag sequencing of 16S rRNA genes from R/V Atlantis cruise AT15-35 in the Cascadia Basin and Juan de Fuca Ridge in 2008 | 2016-01-28 | Preliminary and in progress |
The acetate and inorganic carbon uptake rates as determined via stable isotopic tracers from Maria S. Merian cruise MSM20-5 in 2012; data generated using the formation fluids recovered from CORKs installed at North Pond | 2016-02-03 | Final no updates expected |
Sub-seafloor single amplified genomes (SAGs) from anaerobic Peru Margin sediment collected on R/V JOIDES Resolution cruise JRES-201 in 2002 | 2016-02-04 | Final no updates expected |
Porewater measurements of nitrate concentration and N and O isotopic ratios (d15N and d18O) from bore holes at North Pond; collected during IODP expedition 336 on R/V JOIDES Resolution in the Mid-Atlantic Ridge in 2011 | 2016-02-04 | Preliminary and in progress |
Porewater geochemistry (sulfate, methane, and DIC) from sediments of the White Oak River (WOR), NC, Station H in 2013 (SEDpep project) | 2016-03-11 | Preliminary and in progress |
Activities of extracellular peptidases at Station H of the White Oak River (WOR) Station H in 2013 (SEDpep project) | 2016-03-14 | Preliminary and in progress |
Inhibition data for 3 peptidases at Bogue Sound NC and Tennessee River at Knoxville (SEDpep project) | 2016-03-14 | Preliminary and in progress |
Microbial diversity and geochemistry of marine sediment mesocosm, Cape Lookout Bight, North Carolina | 2016-07-27 | Final no updates expected |
Sequence accession numbers for archaeal and bacterial clone libraries from Guaymas Basin sediments collected from R/V Atlantis cruise AT15-56 in 2009 | 2016-08-10 | Final no updates expected |
Fungal iTAG analyses on Peru Margin sediment core samples from R/V JOIDES Resolution cruise JRES-201 in the Peru Margin from January to March 2002 | 2016-08-15 | Final no updates expected |
40 16S amplicon libraries collected from sediments of the Adelie Basin from R/V JOIDES Resolution JRES-318 from Wellington, New Zealand to Hobart, Australia from January to March 2010 | 2016-08-16 | Preliminary and in progress |
The manually curated genome of the SAG SCGC AD-561-N23; collected from R/V JOIDES Resolution JRES-318 from Wellington, New Zealand to Hobart, Australia from January to March 2010 | 2016-08-16 | Preliminary and in progress |
Whole community (3 domain) metatranscriptomes for subsurface sediment core samples from R/V JOIDES Resolution cruises JRES-201 and JRES-317 in the Peru Margin and Canterbury Basin in 2002 and 2009-10 | 2016-08-16 | Final no updates expected |
Bacterial 16S rRNA sequences from hydrothermal plume particles sampled at 9 degrees North, East Pacific Rise, depth 2500m, on R/V Atlantis cruise AT15-06 in July 2006. | 2016-08-16 | Final no updates expected |
Bacterial 16S rRNA sequences from inactive sulfide chimneys from R/V Atlantis cruise AT11-20 in the North East Pacific Rise in November 2004 | 2016-08-18 | Final no updates expected |
The eukaryotic (poly-A) metatranscriptome for Canterbury Basin from R/V JOIDES Resolution cruise JRES-317 in the Canterbury Basin from 2009-2010 | 2016-08-19 | Final no updates expected |
Bacterial 16S rRNA sequences from seafloor rocks (silicates and sulfides) collected on R/V Thomas G. Thompson cruise TN235 in the Eastern Lau Spreading Center from May to June 2009 | 2016-08-24 | Final no updates expected |
SSU rRNA gene sequences from marine sediments, marine subseafloor, and deep seawater sampled from the Juan de Fuca Ridge Flank from various R/V Atlantis cruises from 2008-2011 (microJdFR project) | 2016-10-07 | Final no updates expected |
Stable carbon isotopic composition of organic matter from seafloor basalts incubated with labeled bicarbonate from R/V Atlantis AT15-51, R/V Kilo Moana KM0923, and Maria S. Merian MSM20-5 cruises | 2016-10-05 | Final no updates expected |
Accession numbers for clone and Illumina amplicon sequence libraries from Dorado Outcrop basalts collected on R/V Atlantic cruise AT26-09 in December 2013 | 2016-10-06 | Final no updates expected |
Porewater DIC concentrations and d13C isotopic values from sediment cores collected on the Guaymas Basin Ridge flanks and the Sonora Margin from R/V El Puma in October 2014 | 2016-10-13 | Final no updates expected |
Porewater methane concentrations from sediment cores collected on the Guaymas Basin Ridge flanks and the Sonora Margin in 2014 from R/V El Puma in October 2014 | 2016-10-14 | Final no updates expected |
Porewater sulfate concentrations from sediment cores collected on the Guaymas Basin Ridge flanks and the Sonora Margin in 2014 from R/V El Puma in October 2014 | 2016-10-14 | Final no updates expected |
Porewater sulfide concentrations from sediment cores collected on the Guaymas Basin Ridge flanks and the Sonora Margin in 2014 from R/V El Puma in October 2014 | 2016-10-14 | Final no updates expected |
16S rRNA gene sequences of cells in marine methane seep sediments from R/V Atlantis and R/V Western Flyer cruises off the Pacific Northwest, USA in 2010 and 2013 | 2016-10-25 | Final no updates expected |
Carbon geochemistry of Santa Elena (Costa Rica) ultramafics and bulk rock carbonate samples from expeditions 149, 173, and 209 on R/V JOIDES Resolution in the Iberia Abyssal Plain, Iberian Margin, and Mid-Atlantic Ridge from 1993-2003 | 2016-11-03 | Final no updates expected |
Description and isotopic composition of the carbonate deposits in the Santa Elena Ophiolite (Costa Rica) and expeditions 149, 173, and 209 on R/V JOIDES Resolution in the Iberia Abyssal Plain, Iberian Margin, and Mid-Atlantic Ridge from 1993-2003 | 2016-11-03 | Final no updates expected |
Sulfur geochemistry of the Santa Elena (Costa Rica) ultramafics; R/V JOIDES Resolution JRES-149, JRES-173, JRES-209 cruises in the Iberia Abyssal Plain, Iberian Margin, and Mid-Atlantic Ridge from 1993-2003 | 2016-11-03 | Final no updates expected |
Polysaccharide hydrolysis rates for Marmara Sea, Guaymas Basin, and Eastern Mediterranean Sea sediments collected from R/V El Puma and R/V Meteor cruises | 2016-12-09 | Final no updates expected |
Geochemistry measurements from the Strytan Hydrothermal Field collected by SCUBA July 15-8 2012 (C-DEBI, Lost City-type hydrothermal system project) | 2017-03-22 | Preliminary and in progress |
Organic acid concentrations from the Strytan Hydrothermal Field collected by SCUBA July 15-8 2012 (C-DEBI, Lost City-type hydrothermal system project) | 2017-03-22 | Preliminary and in progress |
Dissolved inorganic carbon concentrations from the Strytan Hydrothermal Field collected by SCUBA July 15-8 2012 (C-DEBI, Lost City-type hydrothermal system project) | 2017-03-22 | Preliminary and in progress |
CH4, H2, CO, and d13C concentrations from the Strytan Hydrothermal Field collected by SCUBA July 15-8 2012 (C-DEBI, Lost City-type hydrothermal system project) | 2017-03-22 | Preliminary and in progress |
3H-leucine and thymidine incorporation of North Atlantic subseafloor sediments from cruise KN223 on R/V Knorr in the North and West Atlantic Ocean in November 2014 | 2017-03-27 | Final no updates expected |
North Atlantic subseafloor sediment viable microbe numbers/metabolisms from cruise KN223 on R/V Knorr in the North and West Atlantic Ocean in November 2014 | 2017-03-28 | Final no updates expected |
Single cell isotope incorporation of 1H, 2H, 12C14N, 12C15N. 12C12C, 12C13C from Chikyu-337 (IODP 337) | 2017-08-10 | Final no updates expected |
Geochemistry summary data: single cell isotope incorporation of 1H, 2H, 12C14N, 12C15N, 12C12C, 12C13C ions from Chikyu-337 (IODP 337) | 2017-08-10 | Final no updates expected |
Siderophore-enhanced olivine dissolution experiments from the University of Southern California (Microbial Olivine Dissolution project) | 2017-08-17 | Preliminary and in progress |
Lake surface sediment and submarine canyon sediment bacterial V1-V3 iTag sequence libraries collected from CA and MN in 2012. | 2017-10-19 | Final no updates expected |
Collection information and genetic accession identifiers for Single Amplified Virus Genomes from hydrothermal fluids at IODP HOLE U1362B CORK observatory from R/V Atlantis cruise AT18-07 ROV Jason dives at the Juan de Fuca Ridge Flank in July of 2011 | 2022-05-23 | Final no updates expected |
Presence/absence of taxa detected with the Phylochip in a sediment core collected in the Ulleng Basin in 2011 | 2018-06-14 | Final no updates expected |
16S gene sequencing of microbial communities in South China Sea sediments from January to March 2014 | 2018-09-05 | Final no updates expected |
Porewater measurements of nitrate and nitrite concentration and N and O isotopic ratios (d15N and d18O) collected from sites 3 and 10 on the North Atlantic Long Core Cruise R/V Knorr KN223 from October to December 2014 | 2018-10-26 | Final no updates expected |
d13C and d18O isotopic data for carbonate nodules and sedimentary carbonates in Guaymas Basin and Sonora Margin sediments collected from R/V El Puma, leaving Guaymas on October 14, 2014 and returning to Mazatlan on October 27, 2014 | 2019-03-13 | Final no updates expected |
Radiocarbon [14C] ages of sedimentary organic matter and sedimentation rates for Guaymas Basin and Sonora Margin sediments collected from R/V El Puma, leaving Guaymas on October 14, 2014 and returning to Mazatlan on October 27, 2014 | 2019-03-13 | Final no updates expected |
Pore water chemical concentration data and location from push cores collected by the ROV Jason II on dive J2-773 from cruise MSM37 on R/V Maria S. Merian from March to April 2014 | 2019-04-11 | Final no updates expected |
Modeling bio-energetics for South Pacific Gyre marine sediment at site U1370 | 2019-12-20 | Final no updates expected |
16S rRNA gene (from DNA) from samples collected on cruise Chikyu-331 in the Okinawa Trough, Japan from September to October 2010 | 2019-11-05 | Final no updates expected |
16S rRNA gene (from RNA) from samples collected on cruise Chikyu-331 in the Okinawa Trough, Japan from September to October 2010 | 2019-11-05 | Final no updates expected |
Metagenomic data from samples collected on cruise Chikyu-331 in the Okinawa Trough, Japan from September to October 2010 | 2019-11-05 | Final no updates expected |
Organic carbon, d13C, and total nitrogen content of pelagic sediment from the North Atlantic gyre, South Pacific gyre, and Peru Basin from cruises KN223, KNOX02RR, and ODP leg 201 between 2002 and 2013 | 2020-06-15 | Final no updates expected |
Protein assay of proteinaceous material in pelagic sediment from the North Atlantic gyre, South Pacific gyre, and Peru Basin from cruises KN223, KNOX02RR, and ODP leg 201 between 2002 and 2013 | 2020-06-15 | Final no updates expected |
TOC concentrations from sediment cores collected on the Guaymas Basin Ridge flanks and the Sonora Margin from R/V El Puma during October 2014 | 2019-12-12 | Final no updates expected |
Porewater Si concentrations from sediment cores collected on the Guaymas Basin Ridge flanks and the Sonora Margin from R/V El Puma during October 2014 | 2019-12-12 | Final no updates expected |
delta 15N values from sediment cores collected on the Guaymas Basin Ridge flanks and the Sonora Margin from R/V El Puma during October 2014 | 2019-12-12 | Final no updates expected |
delta 13C values from sediment cores collected on the Guaymas Basin Ridge flanks and the Sonora Margin from R/V El Puma during October 2014 | 2019-12-12 | Final no updates expected |
Organic matter C:N ratios from sediment cores collected on the Guaymas Basin Ridge flanks and the Sonora Margin from R/V El Puma during October 2014 | 2019-12-12 | Final no updates expected |
Calculated power from the oxidation of necromass that is produced in marine sediment on a global scale. | 2019-12-20 | Final no updates expected |
Calculated power from the oxidation of biomolecules with oxygen at South Pacific Gyre (hole U1370, IODP Expedition 329) | 2019-12-20 | Final no updates expected |
Solution 31P NMR spectra files from sediment samples collected during cruises in the Arctic Ocean, California Margin, and Equatorial Pacific from 1992-1998 | 2020-02-28 | Final no updates expected |
Molybdate reactive phosphorus concentrations in NMR pretreatment extracts from sediment samples collected during cruises in the Arctic Ocean, California Margin, and Equatorial Pacific from 1992-1998 | 2020-04-13 | Final no updates expected |
16S rRNA gene datasets, metagenomes, and metatranscriptomes from cores collected on R/V Knorr cruise KN223 in the North and West Atlantic Ocean from October to December 2014 | 2020-02-28 | Final no updates expected |
Total molybdate reactive and unreactive phosphorus concentrations from sediment extracts from sediment samples collected during cruises in the Arctic Ocean, California Margin, and Equatorial Pacific from 1992-1998 | 2020-06-23 | Final no updates expected |
Total phosphorus and metal concentrations from sediment extracts from samples collected during cruises in the Arctic Ocean, California Margin, and Equatorial Pacific from 1992-1998 | 2020-06-23 | Final no updates expected |
Total phosphorus concentrations in NMR sediment pretreatment extracts from samples collected during cruises in the Arctic Ocean, California Margin, and Equatorial Pacific from 1992-1998 | 2020-06-23 | Final no updates expected |
Table 1: Experimental conditions and fluid carbonate chemistry for RPI-3 run where only aragonite precipitated | 2020-03-25 | Final no updates expected |
Table 2. Elemental ratios and partition coefficients for CaCO3 in deepsea conditions: Mg, S, Sr, and Ba between crystallized solids and fluid. | 2020-03-25 | Final no updates expected |
Thermovibrio ammonificans HB1 genome manual curation | 2020-04-13 | Final no updates expected |
Metagenomic data from site U1382B at North Pond (IODP 336), western flank of the mid-Atlantic Ridge from core samples collected in November of 2011 | 2020-04-22 | Final no updates expected |
Carbon isotopic compositions and fractionation factors of M. jannaschii in high and low hydrogen (H2) environments | 2020-05-25 | Final no updates expected |
Carbon near edge X-ray absorption fine structure (NEXAFS) spectra of standard compounds | 2020-06-15 | Final no updates expected |
Carbon near edge X-ray absorption fine structure (NEXAFS) spectra from pelagic sediment from the North Atlantic gyre, South Pacific gyre, and Peru Basin from cruises KN223 (R/V Knorr), KNOX02RR (R/V Roger Revelle), and ODP leg 201 between 2002 and 2014 | 2020-07-22 | Final no updates expected |
Molybdate reactive phosphorus concentrations in NMR pretreatment extracts from sediment samples collected during R/V JOIDES Resolution cruise JRES-336 (IODP336, North Pond) to the western flank of the mid-Atlantic Ridge in November of 2011 | 2020-06-23 | Preliminary and in progress |
Total phosphorus concentrations in NMR sediment pretreatment extracts from samples collected during R/V JOIDES Resolution cruise JRES-336 (IODP336, North Pond) to the western flank of the mid-Atlantic Ridge in November of 2011 | 2020-06-23 | Final no updates expected |
Solution 31P NMR spectra files from sediment samples collected during R/V JOIDES Resolution cruise JRES-336 (IODP336, North Pond) to the western flank of the mid-Atlantic Ridge in November of 2011 | 2020-06-23 | Final no updates expected |
Geochemical data collected from Whillans Subglacial Lake sediment cores in West Antarctica | 2020-08-27 | Data not available |
pmoA sequences amplified from DNA extracted from Whillans Subglacial Lake sediment in West Antarctica | 2020-09-02 | Preliminary and in progress |
High throughput tag-sequencing accessions (18S rRNA gene region) and environmental metadata from Axial Seamount, 2013-2015 | 2020-11-05 | Final no updates expected |
High throughput tag-sequencing data from Gorda Ridge Hydrothermal vent field, including 16S and 18S rRNA gene sequences, and environmental metadata from Gorda Ridge Seamount, May/June 2019 | 2020-11-09 | Final no updates expected |
Major catabolic pathway of organic carbon oxidation in Quaternary-age sediment quantified from bio-energetic modeling of subseafloor parameters on a 0.25°×0.25° resolution global grid | 2020-11-13 | Preliminary and in progress |
Power produced by microbial POC degradation in Quaternary-age sediment quantified from bio-energetic modeling of subseafloor parameters on a 0.25°×0.25° resolution global grid | 2020-11-13 | Preliminary and in progress |
Microbial power production per cell in Quaternary-age sediment quantified from bio-energetic modeling of subseafloor parameters on a 0.25°×0.25° resolution global grid | 2020-11-13 | Preliminary and in progress |
Cell-specific power utilization (power per cell) in methanogenic, oxic, and sulfate-reducing sediments quantified from bio-energetic modeling of subseafloor parameters on a 0.25°×0.25° resolution global grid | 2020-11-13 | Preliminary and in progress |
POC concentration at the sediment water interface quantified from bio-energetic modeling on a 0.25°×0.25° resolution global grid | 2020-11-13 | Preliminary and in progress |
Summary geochemistry and radiotracer rates for 30 marine sediment cores covering eight sites and four geochemical regimes | 2020-11-19 | Final no updates expected |
Costa Rica Margin Subseafloor Microbial Community Analysis | 2017-10-17 | Preliminary and in progress |
16S rRNA sequences from subsurface microbial communities (Blackwood Sinkhole) | 2021-05-25 | Final no updates expected |
18S rRNA amplicon sequencing of microbial eukaryotes from the Mid-Cayman Rise acquired Jan-Feb, 2020 | 2023-11-06 | Final with updates expected |