Principal Investigator: Mak A. Saito (Woods Hole Oceanographic Institution)
Journal of Proteome Research~2023~22~Paoletti, Madeline M. and Fournier, Gregory P. and Dolan, Erin L. and Saito, Mak A.~https://doi.org/10.1021/acs.jproteome.3c00152~~~~~Metaproteogenomic Profile of a Mesopelagic Adenylylsulfate Reductase: Course-Based Discovery Using the Ocean Protein Portal~~p. 2871-2879~10459867~10444464~OSTI~2023-09-02 04:05:11.20~
Proceedings of the National Academy of Sciences~2020~~Hawco, Nicholas J. and McIlvin, Matthew M. and Bundy, Randelle M. and Tagliabue, Alessandro and Goepfert, Tyler J. and Moran, Dawn M. and Valentin-Alvarado, Luis and DiTullio, Giacomo R. and Saito, Mak A.~https://doi.org/10.1073/pnas.2001393117~~~~~Minimal cobalt metabolism in the marine cyanobacterium <i>Prochlorococcus</i>~~202001393~10164414~10164414~OSTI~2020-06-24 13:01:52.560~
Nature Microbiology~2022~7~Held, Noelle A. and Waterbury, John B. and Webb, Eric A. and Kellogg, Riss M. and McIlvin, Matthew R. and Jakuba, Michael and Valois, Frederica W. and Moran, Dawn M. and Sutherland, Kevin M. and Saito, Mak A.~https://doi.org/10.1038/s41564-021-01028-1~~~~~Dynamic diel proteome and daytime nitrogenase activity supports buoyancy in the cyanobacterium Trichodesmium~~~10321597~10321597~OSTI~2022-04-14 23:03:27.390~
Journal of Proteome Research~2020~19~Saunders, Jaclyn K. and Gaylord, David A. and Held, Noelle A. and Symmonds, Nicholas and Dupont, Christopher L. and Shepherd, Adam and Kinkade, Danie B. and Saito, Mak A.~https://doi.org/10.1021/acs.jproteome.0c00385~~~~~METATRYP v 2.0: Metaproteomic Least Common Ancestor Analysis for Taxonomic Inference Using Specialized Sequence Assemblies—Standalone Software and Web Servers for Marine Microorganisms and Coronaviruses~~4718 to 4729~10213872~10213872~OSTI~2021-06-15 13:03:35.46~
Frontiers in Microbiology~2024~15~Schiksnis, Cara and Xu, Min and Saito, Mak A. and McIlvin, Matthew and Moran, Dawn and Bian, Xiaopeng and John, Seth G. and Zheng, Qiang and Yang, Nina and Fu, Feixue and Hutchins, David A.~https://doi.org/10.3389/fmicb.2024.1323499~~~~~Proteomics analysis reveals differential acclimation of coastal and oceanic Synechococcus to climate warming and iron limitation~~~10493322~10493322~OSTI~2024-03-01 07:45:25.840~
Journal of Proteome Research~2021~20~McIlvin, Matthew R. and Saito, Mak A.~https://doi.org/10.1021/acs.jproteome.1c00588~~~~~Online Nanoflow Two-Dimension Comprehensive Active Modulation Reversed Phase–Reversed Phase Liquid Chromatography High-Resolution Mass Spectrometry for Metaproteomics of Environmental and Microbiome Samples~~~10312339~10312339~OSTI~2022-04-14 23:03:30.500~
Metallomics~2021~13~Mazzotta, Michael G and McIlvin, Matthew R and Moran, Dawn M and Wang, David T and Bidle, Kay D and Lamborg, Carl H and Saito, Mak A~https://doi.org/10.1093/mtomcs/mfab060~~~~~Characterization of the metalloproteome of <i>Pseudoalteromonas</i> (BB2-AT2): biogeochemical underpinnings for zinc, manganese, cobalt, and nickel cycling in a ubiquitous marine heterotroph~~~10312340~10312340~OSTI~2022-04-14 23:03:28.640~
Current Biology~2023~33~Johnson, Matthew D. and Moeller, Holly V. and Paight, Christopher and Kellogg, Riss M. and McIlvin, Matthew R. and Saito, Mak A. and Lasek-Nesselquist, Erica~https://doi.org/10.1016/j.cub.2023.01.027~~~~~Functional control and metabolic integration of stolen organelles in a photosynthetic ciliate~~973 to 980.e5~10424795~10424795~OSTI~2023-06-22 16:55:04.550~
Metallomics~2020~12~Mazzotta, Michael G. and McIlvin, Matthew R. and Saito, Mak A.~https://doi.org/10.1039/d0mt00034e~~~~~Characterization of the Fe metalloproteome of a ubiquitous marine heterotroph, <i>Pseudoalteromonas</i> (BB2-AT2): multiple bacterioferritin copies enable significant Fe storage~~654 to 667~10164391~10164391~OSTI~2021-06-03 13:03:36.996~
Limnology and Oceanography~2020~65~Kellogg, Riss M. and McIlvin, Matthew R. and Vedamati, Jagruti and Twining, Benjamin S. and Moffett, James W. and Marchetti, Adrian and Moran, Dawn M. and Saito, Mak A.~https://doi.org/10.1002/lno.11471~~~~~Efficient zinc/cobalt inter‐replacement in northeast Pacific diatoms and relationship to high surface dissolved Co : Zn ratios~~p. 2557-2582~10164418~10448078~OSTI~2023-08-29 04:05:45.353~
ISME Communications~2021~1~Held, Noelle A. and Sutherland, Kevin M. and Webb, Eric A. and McIlvin, Matthew R. and Cohen, Natalie R. and Devaux, Alexander J. and Hutchins, David A. and Waterbury, John B. and Hansel, Colleen M. and Saito, Mak A.~https://doi.org/10.1038/s43705-021-00034-y~~~~~Mechanisms and heterogeneity of in situ mineral processing by the marine nitrogen fixer <i>Trichodesmium</i> revealed by single-colony metaproteomics~~~10321598~10275240~OSTI~2024-03-14 20:02:44.213~
Nature Communications~2022~13~Kellogg, Riss M. and Moosburner, Mark A. and Cohen, Natalie R. and Hawco, Nicholas J. and McIlvin, Matthew R. and Moran, Dawn M. and DiTullio, Giacomo R. and Subhas, Adam V. and Allen, Andrew E. and Saito, Mak A.~https://doi.org/10.1038/s41467-022-29603-y~~~~~Adaptive responses of marine diatoms to zinc scarcity and ecological implications~~~10321600~10381744~OSTI~2022-11-24 16:03:16.970~
Nature Geoscience~2020~13~Saito, Mak A. and McIlvin, Matthew R. and Moran, Dawn M. and Santoro, Alyson E. and Dupont, Chris L. and Rafter, Patrick A. and Saunders, Jaclyn K. and Kaul, Drishti and Lamborg, Carl H. and Westley, Marian and Valois, Frederica and Waterbury, John B.~10.1038/s41561-020-0565-6~~~~~Abundant nitrite-oxidizing metalloenzymes in the mesopelagic zone of the tropical Pacific Ocean~~355 to 362~10155819~10155819~OSTI~2020-06-19 01:02:05.666~