Dataset: Total spectral count of proteins from R/V Falkor cruise 160115 for the ProteOMZ expedition in the Central Pacific in 2016

Release Date:2019-02-24Final no updates expectedDOI: 10.26008/1912/bco-dmo.737620.3Version 3 (2022-06-06)Dataset Type:Cruise Results

Principal Investigator: Mak A. Saito (Woods Hole Oceanographic Institution)

BCO-DMO Data Manager: Hannah Ake (Woods Hole Oceanographic Institution)

BCO-DMO Data Manager: Amber D. York (Woods Hole Oceanographic Institution)


Project: The ProteOMZ Expedition: Investigating Life Without Oxygen in the Pacific Ocean (ProteOMZ (Proteomics in an Oxygen Minimum Zone))


Abstract

Relative protein abundance data of the upper 1000m water column from the ProteOMZ R/V Falkor expedition. There are 56,577 protein identifications over 102 samples, for ~6 million data points.

These data are part of the Ocean Protein Portal "ProteOMZ" dataset (https://proteinportal.whoi.edu/; Saito et al., 2019).


Related Datasets

IsRelatedTo

Dataset: ProteOMZ identified protein sequences
Relationship Description: These datasets are part of the Ocean Protein Portal "ProteOMZ" dataset (https://proteinportal.whoi.edu/; Saito et al., 2019).
Saito, M. A. (2024) FASTA file of identified protein sequences from the R/V Falkor cruise 160115 for the ProteOMZ expedition in the Central Pacific during 2016. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 3) Version Date 2019-02-15 doi:10.26008/1912/bco-dmo.737611.3
IsRelatedTo

Dataset: ProteOMZ Exclusive Peptide Level Spectral Counts
Relationship Description: These datasets are part of the Ocean Protein Portal "ProteOMZ" dataset (https://proteinportal.whoi.edu/; Saito et al., 2019).
Saito, M. A., Saunders, J. (2022) Relative protein abundance from scaled and corrected exclusive peptide spectral counts from the ProteOMZ R/V Falkor expedition cruise FK160115 in the Pelagic central Pacific Ocean in 2016. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2022-01-13 doi:10.26008/1912/bco-dmo.868030.1
IsSupplementedBy

Dataset: ProteOMZ Peptide Level Spectral Counts
Relationship Description: The peptides related to these proteins
Saito, M. A. (2024) Total spectral counts of peptides from the R/V Falkor cruise 160115 in the Central Pacific for the ProteOMZ expedition in 2016. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2022-06-03 doi:10.26008/1912/bco-dmo.737596.1

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