©2020 Biological and Chemical Oceanography Data Management Office.This dataset includes metadata from metaproteomic samples collected at Station 2 during the R/V Knorr Cruise KN210-04 in the Western Atlantic Ocean between Uruguay and Barbados in 2013. The accompanying total spectral counts for proteins and peptides from these samples are available on the PRoteomics IDEentifications Database (PRIDE) under Project PXD034035.
The dataset includes total spectral counts for proteins and peptides. Four files and a link to raw data at the domain repository are included:
1) Sample metadata file with station locations, depth, time of collection and sample IDs described by this BCO-DMO page. (original file name: DeepDOM_sample_metadata_for_OPP.csv)
2) Raw mass spectral data files are available on PRIDE and ProteomeXchange:
ProteomeXchange title: Microbial Metaproteome from the Western Atlantic Ocean DeepDOM KN210-04 Expedition
ProteomeXchange accession: PXD034035
Project Webpage: http://www.ebi.ac.uk/pride/archive/projects/PXD034035
FTP Download: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/05/PXD034035
Saito, M. A., McIlvin, M. R. (2022) Sample information for metaproteomic samples taken from Station 2 from R/V Knorr KN210-04 in the Western Atlantic Ocean between Uruguay and Barbados from March 2013. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2022-06-13 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/875622 [access date]
Terms of Use
This dataset is licensed under Creative Commons Attribution 4.0.
If you wish to use this dataset, it is highly recommended that you contact the original principal investigators (PI). Should the relevant PI be unavailable, please contact BCO-DMO (info@bco-dmo.org) for additional guidance. For general guidance please see the BCO-DMO Terms of Use document.