Dataset: Sediment Nitrification Incubation data of a subterrarnian estuary core take in July 2020 in Gloucester Point, Virginia

Final no updates expectedDOI: 10.26008/1912/bco-dmo.915302.1Version 1 (2023-12-04)Dataset Type:experimental

Principal Investigator: Bongkeun Song (Virginia Institute of Marine Science)

Co-Principal Investigator: Iris C. Anderson (Virginia Institute of Marine Science)

Co-Principal Investigator: Craig Tobias (University of Connecticut)

Student: Stephanie J. Wilson (Virginia Institute of Marine Science)

BCO-DMO Data Manager: Karen Soenen (Woods Hole Oceanographic Institution)


Project: Collaborative Research: Cryptic nitrogen cycling in the anoxic subterranean estuary (Subsurface cryptic N cycle)


Abstract

These data are the result of a sediment slurry incubation experiment conducted with 15N-labeled ammonium to quantify nitrification rates in the sediments of a shallow, sandy subterranean estuary in Gloucester Point, VA, USA. Triplicate sediment cores that were 50cm in length were collected and sectioned into 10cm intervals. Homogenized sediment was incubated with porewater from the same depth interval that had been amended with 15N-labeled ammonium. Sediments were incubated in the dark for zero,...

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These data were collected during July 2020 from a sandy subterranean estuary (STE) located in Gloucester Point, Virginia, USA. A pole-corer was used to collect triplicate sediment cores roughly 50cm in length from the mid tide line of the beach during low tide. Cores were sectioned into ten centimeter increments. Porewater was collected from surface water and piezometers placed at 10cm increments to the same depth of 50cm.  Core sections were used in isotope tracer incubations with 15N-labeled substrates to measure potential nitrification rates. Briefly, 10 g of the composited sediment from each 10 cm section were used in sediment slurry incubation experiments with 40mL of porewater from the same depth interval. Samples were incubated for 0, 6, and 12 hours in in 100mL HDPE bottles and amended with 5 atom% 15 µM 15NH4+ (Cambridge Isotope) at the measured in situ temperature. After the incubation period, samples were spun down, porewater was decanted and filtered with a 0.45 µm syringe filter (Whatman GE) and were frozen (-20 °C) until analysis.  Porewater nutrient concentrations were analyzed for NOx (nitrate + nitrite), nitrite, and ammonium with a Lachat autoanalyzer. The isotopic enrichment of nitrate  and nitrite products were measured  using a gas bench isotope ratio mass spectrometer (IRMS, Delta V Plus, Thermo Fisher Scientific, Waltham, MA) using the bacterial reduction method. A culture of Pseudomonas aureofaciens reduced NOx in collected samples to N2O. The isotopic composition of the N2O was measured with isotope-ratio mass spectrometry (IRMS) (Sigman et al., 2001). 


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