| Brooded coral larval size, protein content, symbiont (Symbiodinium) densities, maximum photochemical efficiency of PSII (Cumbo, 2012) from Taiwan, 2010 (Cumbo, 2012) (MCR LTER project, Climate_Coral_Larvae project) | Branson Digital Sonifier S-250D, USA
| sonicator |
| Protein content of brooded coral larvae at high and ambient temperature and pCO2, March 2011 (Cumbo et al, JEMBE, 2013) (MCR LTER & Climate Coral Larvae projects) | Branson Digital Sonifier
| sonicator |
| Respiration and protein content of brooded coral larvae at high and ambient temperature and pCO2, Taiwan, March 2011 (Cumbo et al, JEMBE, 2013) (MCR LTER & Climate Coral Larvae projects) | Branson Digital Sonifier
| sonicator |
| Reactive oxygen species are linked to the toxicity of the dinoflagellate Alexandrium spp. to protists | The Fisher Scientific™ Model 50 Sonic Dismembrator is compact, portable and extremely simple to operate. Weighing less than 4 lb., this model is the smallest unit on the market and is highly effective for cell disruption, sample preparation and many other small volume applications.
| Sonic dismembrator (Model 50, Fisher Scientific) |
| Influence of predator-prey evolutionary history, chemical alarm-cues and feeding selection on induction of toxin production in a marine dinoflagellate | The Fisher Scientific™ Model 50 Sonic Dismembrator is compact, portable and extremely simple to operate. Weighing less than 4 lb., this model is the smallest unit on the market and is highly effective for cell disruption, sample preparation and many other small volume applications.
| Sonic dismembrator (Model 50, Fisher Scientific) |
| A multi-phylum study of grazer-induced paralytic shellfish toxin production in the dinoflagellate Alexandrium fundyense: A new perspective on control of algal toxicity | The Fisher Scientific™ Model 50 Sonic Dismembrator is compact, portable and extremely simple to operate. Weighing less than 4 lb., this model is the smallest unit on the market and is highly effective for cell disruption, sample preparation and many other small volume applications.
| Sonic dismembrator (Model 50, Fisher Scientific) |
| Toxin content of Alexandrium catenella in response of nitrogen sources, algal alarm cues, and grazer exposure | The Fisher Scientific™ Model 50 Sonic Dismembrator is compact, portable and extremely simple to operate. Weighing less than 4 lb., this model is the smallest unit on the market and is highly effective for cell disruption, sample preparation and many other small volume applications.
| Sonic dismembrator (Model 50, Fisher Scientific) |
| Ambient concentrations of acetate, glycerol, and mannitol measured from samples collected during R/V Endeavor cruise EN616 in the northwest Atlantic in July 2018 | To further concentrate the samples, the ethanol solutions were dried down under a gentle nitrogen gas stream at 70°C and reconstituted in 100µL of fresh ethanol and sonicated for 120min.
| sonicator |
| Effect of Marine Snow Distribution on Copepod Ingestion of Marine Snow Experiments 2018 | | sonicator |
| Data pertaining to the development of larvae past the planula stage from experiments investigating heat priming in Nematostella vectensis | | water bath sonicator (Diagenode UCD-200; Diagenode Inc., Denville, NJ, USA) |
| Data pertaining to dose-response curves (DRC) quantifying survival of larvae after exposure to heat ramps from experiments investigating heat priming in Nematostella vectensis | | water bath sonicator (Diagenode UCD-200; Diagenode Inc., Denville, NJ, USA) |
| Expression of heat shock protein 70 (HSP70) in larvae at 11 days post-fertilization (DPF) from experiments investigating heat priming in Nematostella vectensis | | water bath sonicator (Diagenode UCD-200; Diagenode Inc., Denville, NJ, USA) |
| Heat tolerance (survival) of juveniles at 6 WPF following heat shock from experiments investigating heat priming in Nematostella vectensis | | water bath sonicator (Diagenode UCD-200; Diagenode Inc., Denville, NJ, USA) |
| Lethal temperature 50s (LT50s) displayed by larvae derived from dose-response curves after heat shock from experiments investigating heat priming in Nematostella vectensis | | water bath sonicator (Diagenode UCD-200; Diagenode Inc., Denville, NJ, USA) |
| Long-term body column lengths and tentacle numbers of larvae and juveniles from experiments investigating heat priming in Nematostella vectensis | | water bath sonicator (Diagenode UCD-200; Diagenode Inc., Denville, NJ, USA) |
| Respiration rates and protein content of larvae from experiments investigating heat priming in Nematostella vectensis | | water bath sonicator (Diagenode UCD-200; Diagenode Inc., Denville, NJ, USA) |
| Sizes of larvae from 4-11 days post-fertilization from experiments investigating heat priming in Nematostella vectensis | | water bath sonicator (Diagenode UCD-200; Diagenode Inc., Denville, NJ, USA) |
| Supplementary Table 3B: Replicate cell counts for the 11 samples and alkaline phosphatase activity measurements available for any of the 11 samples | Cell separation was performed through sonication with Diagenode Bioruptor sonication device.
| Diagenode Bioruptor |
| Metegenomic sequences from Lau Basin low temperature vents and Loihi Seamount; from R/V Roger Revelle and R/V Thomas G. Thompson cruises RR1211 and TN225 in the Northeast Lau Basin, Loihi Seamount from 2008-2012 | | Covaris S2 sonicator |
| Major inorganic ions in Primary Marine Aerosols (PMA) generated from seawater collected near the BATS station during R/V Atlantic Explorer cruises AE2113 (July 2021) and AE2303 (January 2023) | To process the samples, 5 mL of high purity laboratory water (Milli-Q brand water) was added to each Simport vial containing a PMA sample filter followed by alternating steps of vortexing (5 min) and sonicating (5 min) three times.
| Branson 1200 (model B1200R-1) |
| Calcification Rates and Biomass of 4 Coral Species, 2 Temperatures and 2 pCO2 Levels from Experiments at LTER site in Moorea, French Polynesia, 2011 (OA_Corals project) | Ultrasonic dismembrator (Fisher model 216 15-338-550; fitted with a 3.2 mm diameter probe, Fisher 15-338-67)
| |
| Tank seawater conditions from Coral/Temperature/pCO2 Experiments at LTER site in Moorea, French Polynesia, 2011 (OA_Corals project) | Ultrasonic dismembrator (Fisher model 216 15-338-550; fitted with a 3.2 mm diameter probe, Fisher 15-338-67)
| |
| Mesozooplankton grazing rates from samples collected in the oceanic Gulf of Mexico on R/V Nancy Foster cruises NF1704 and NF1802 in May 2017 and May 2018 | Wet weight subsamples were placed in borosilicate glass tubes with 7 mL of 90% acetone and homogenized (multiple 20-sec bursts) in an ice bath with a Vibracell sonicator probe.
| Vibracell sonicator probe |
| Metagenome and metatranscriptome sequences from deep-sea hydrothermal vent microbial communities collected on cruises AT42-22, TN405, and NA108 from May 2019 to Jun 2022 | Input DNA diluted to 50 ng total, or all DNA input (For low concentration samples) and sheared to target 400 bps with Covaris M220 focused-ultrasonicator
| Covaris M220 focused-ultrasonicator |
| Single amplified genomes (SAGs) of chemoautotrophs from global deep sea samples (Dark ocean chemoautotrophs project) | | Covaris focused ultrasonicator |
| Comparative analysis of tissue biomass and energy reserves of six coral species from nearshore and offshore reefs in Palau, Micronesia during March 2017 | The samples were sonicated at 35% intensity for 2 minutes using a Fisher Scientific model CL-18 sonicator.
| Sonicator model CL-18, Fisher Scientific |
©2020 Biological and Chemical Oceanography Data Management Office.