Award: OCE-1260233

Award Title: Collaborative research: Adaptation of key N2-fixing cyanobacteria to changing CO2
Funding Source: NSF Division of Ocean Sciences (NSF OCE)
Program Manager: David L. Garrison

Outcomes Report

This project studied the response of keystone marine cyanobacteria such as Trichodesmium, Synechococcus, and Prochlorococcus to multiple stressors. The study observed selection by high CO2 treatments during long-term experimental evolution experiment resulting in a constitutive increase in nitrogen fixation rates. This observation showed that this cyanobacterium could become "stuck" with elevated N2 fixation rates in the future ocean conditions, even after return to pre-industrial conditions. This outcome has consequences for ocean biology and biogeochemistry, including those connected to iron and phosphorus limitation of new production in marine ecosystems if enhanced productivity continues. Further this study examined the influence of co-limitation by iron and phosphorus, two nutrients that can both be so low as to constrain productivity in the oceans. In these experiments a co-limited phenotype was discovered that was unique from single limitation, implying that multiple stressors have their own unique response as opposed to being additive independent responses. Iron scarcity experiments were conducted on coastal and open ocean Synechococcus that revealed a highly dynamic response in coastal isolates implying conditions of iron scarcity are far more important than previously recognized. Zinc toxicity studies were also conducted on the abundant cyanobacterium Prochlorococcus, revealing that Pacific isolates can extraordinarily susceptible to zinc toxicity likely due to lack of exposure in that region. Finally a review of two component regulatory systems, which contribute to the key control switches within bacteria, found that marine microbes have significantly different ratios of their two component systems compared to previously characterized organisms. This deviance is likely due to the extreme scarcity of nutrients and the need to conserve nitrogen and phosphate in protein and DNA involved in maintaining these control systems. Finally this project contributed to the development of a novel "targeted metaproteomic" method to allow direct absolute and high-throughput measurement of proteins in natural environments. Overall, this project furthered knowledge regarding the influence of key nutrients and micronutrients on abundant phytoplankton in the ocean. Last Modified: 07/17/2018 Submitted by: Mak A Saito
DatasetLatest Version DateCurrent State
Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project)2018-03-15Final no updates expected
Trichodesmium growth rate and cell size related to pCO2 and nutrients from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project)2016-06-22Final no updates expected
FASTA file of protein identifications from R/V Kilo Moana KM1128 in the North Pacific during 2011 (MetZyme project)2017-07-14Final no updates expected
16S tag data, metagenomic data, and a draft assembled genome of Altermonas macleodii derived from laboratory-maintained Trichodesmium erythraeum cultures2018-03-09Final no updates expected
NCBI accessions for raw RNA-seq fastq in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California: deep metatranscriptomic sequencing of Trichodesmium enrichment cultures (HiCO2_AdaptCyano project)2018-02-14Final no updates expected
Total spectral count of proteins from R/V Kilo Moana cruise KM1128 for the METZYME expedition in the tropical North Pacific in 2011.2022-07-06Under revision
Station locations for the global metaproteomic dataset from R/V Kilo Moana cruise KM1128, the METZYME expedition in the tropical North Pacific in 2011.2019-04-12Final no updates expected
Peptides and their spectral counts from KM1128 the METZYME expedition on R/V Kilo Moana in the tropical North Pacific in 20112021-03-30Under revision

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Principal Investigator: Mak A. Saito (Woods Hole Oceanographic Institution)