| Bacterial abundance, thymidine & leucine incorporation from R/V Weatherbird II WB0409, WB0413, WB0506, WB0508 cruises in the Sargasso Sea, 2004-2005 (EDDIES project) | bacteria cell concentration
| bacteria |
| Bacterial cell counts and Dissolved Organic Carbon (DOC) measurements from R/V Atlantis AT32, AT34, AT38, and AT39-06 in the western North Atlantic Ocean (35°N to 57°N; 45°W) in Nov. 2015, May 2016, Sep 2017, Mar/Apr 2018 | Bacterial abundance measure by epifluorescent microscopy (Porter & Feig; 1980)
| Cells |
| Bacterial cell counts and Dissolved Organic Carbon (DOC) measurements from R/V Atlantis AT32, AT34, AT38, and AT39-06 in the western North Atlantic Ocean (35°N to 57°N; 45°W) in Nov. 2015, May 2016, Sep 2017, Mar/Apr 2018 | Bacterial abundance standard deviation
| Cells_sd |
| Ice core bacteria data from RVIB Nathaniel B. Palmerand ARSV Laurence M. Gould cruises NBP0104, LMG0106, NBP0204,and LMG0205 in the Southern Ocean from 2001-2002 (SOGLOBEC project; Sea Ice Microbes project) | bacteria abundance
| bact_abun |
| Water column bacteria data from ARSV Laurence M. Gould cruises LMG0104 and LMG0106 in the Southern Ocean in 2001 (SOGLOBEC project; Sea Ice Microbes project) | bacteria abundance
| bact_abun |
| Seawater biogeochemistry inshore and offshore the Bermuda coral reef from the Bermuda coral reef platform and adjacent Sargasso Sea extending to Bermuda Atlantic Time Series-station from 2014-2018 | total bacterial cells
| bacteria |
| Biogeochemical and biological data from Niskin bottle samples from R/V Atlantic Explorer cruises AE1102, AE1118, AE1206, AE1219 in the Sargasso Sea, Bermuda Atlantic Time-Series Station from 2011-2012 (Trophic BATS project) | Bacterial abundance by DAPI staining and epifluorescent counting (cells/mL).
| bact_abund |
| Survey biogeochemical data from R/V Atlantis AT32, AT34, AT38, and AT39-06 in the western North Atlantic Ocean (35°N to 57°N; 45°W) in Nov. 2015, May 2016, Sep 2017, Mar/Apr 2018 | Bacterial abundance by epifluorescent microscopy and flow cytometry (Porter & Feig,1980; Halewood et al, 1980)
| BactAbund |
| Survey biogeochemical data from R/V Atlantis AT32, AT34, AT38, and AT39-06 in the western North Atlantic Ocean (35°N to 57°N; 45°W) in Nov. 2015, May 2016, Sep 2017, Mar/Apr 2018 | Bacterial Standard Deviation
| BactAbund_sd |
| BIOS-SCOPE survey biogeochemical data as collected on Atlantic Explorer cruises (AE1614, AE1712, AE1819, AE1916) from 2016 through 2019 | Bacterioplankton abundance from microscopy with DAPI stain
| Bact |
| Station locations from fishing vessels in the Southern California Bight off Huntington Beach in 2012 (SoCalPlumeEx2012 project) | HBAC (cells/mL) - flow cytometric analysis of heterotrophic bacteria
| HBAC |
| Discrete bottle samples collected during BATS Validation (BVAL) cruises from April 1991 through June 2023 | Bacteria enumeration
| Bact |
| 1B: Bioavailability of dissolved organic carbon produced by Thalassiosira weissflogii grown under different pCO2 and temperature conditions from UCSB Marine Science Institute Passow Lab from 2009 to 2010 (OA - Effects of High CO2 project) | Bacteria as determined by flow cytometry at T0 (0 hrs)
| FCM_T0_0 |
| 1B: Bioavailability of dissolved organic carbon produced by Thalassiosira weissflogii grown under different pCO2 and temperature conditions from UCSB Marine Science Institute Passow Lab from 2009 to 2010 (OA - Effects of High CO2 project) | Bacteria as determined by flow cytometry at T1 45 hrs)
| FCM_T1_45 |
| 1B: Bioavailability of dissolved organic carbon produced by Thalassiosira weissflogii grown under different pCO2 and temperature conditions from UCSB Marine Science Institute Passow Lab from 2009 to 2010 (OA - Effects of High CO2 project) | Bacteria as determined by flow cytometry at T2 (70.5 hrs)
| FCM_T2_70point5 |
| 1B: Bioavailability of dissolved organic carbon produced by Thalassiosira weissflogii grown under different pCO2 and temperature conditions from UCSB Marine Science Institute Passow Lab from 2009 to 2010 (OA - Effects of High CO2 project) | Bacteria as determined by flow cytometry at T3 (97.5 hrs)
| FCM_T3_97point5 |
| 1B: Bioavailability of dissolved organic carbon produced by Thalassiosira weissflogii grown under different pCO2 and temperature conditions from UCSB Marine Science Institute Passow Lab from 2009 to 2010 (OA - Effects of High CO2 project) | Bacteria as determined by flow cytometry at T4 (117 hrs)
| FCM_T4_117 |
| 1B: Bioavailability of dissolved organic carbon produced by Thalassiosira weissflogii grown under different pCO2 and temperature conditions from UCSB Marine Science Institute Passow Lab from 2009 to 2010 (OA - Effects of High CO2 project) | Bacteria as determined by flow cytometry at T5 (142.5 hrs)
| FCM_T5_142pont5 |
| 1B: Bioavailability of dissolved organic carbon produced by Thalassiosira weissflogii grown under different pCO2 and temperature conditions from UCSB Marine Science Institute Passow Lab from 2009 to 2010 (OA - Effects of High CO2 project) | Bacteria as determined by flow cytometry at T6 (169.5 hrs)
| FCM_T6_169point5 |
| 3A: Removal of organic carbon by natural bacterioplankton communities as a function of pCO2 from laboratory experiments between 2012 and 2016 | Bacterial abundance multiplied by 10^6
| bact_abun_x10e6_avg |
| 3A: Removal of organic carbon by natural bacterioplankton communities as a function of pCO2 from laboratory experiments between 2012 and 2016 | Standard error of bacterial abundance multiplied by 10^6
| bact_abun_x10e6_stderr |
| 3A: Removal of organic carbon by natural bacterioplankton communities as a function of pCO2 from laboratory experiments between 2012 and 2016 | Standard deviation Bacterial abundance multiplied by 10^6
| bact_abun_x10e6_stdev |
| Extracted chlorophyll data, particulate carbon and nitrogen, flow cytometry and 15N2/13C rate measurements collected during EN596 from April 2017 in the North Atlantic | High Nucleic Acid
| HNA |
| Extracted chlorophyll data, particulate carbon and nitrogen, flow cytometry and 15N2/13C rate measurements collected during EN596 from April 2017 in the North Atlantic | Low Nucleic Acid
| LNA |
| Extracted chlorophyll data, particulate carbon and nitrogen, flow cytometry and 15N2/13C rate measurements collected during EN596 from April 2017 in the North Atlantic | sum of High Nucleic Acid and Low Nucleic Acid
| tot_bact |
| Taxonomy and abundance of microbial cells (phytoplankon and heterotrophic bacteria) during a deployment of the Environmental Sample Processor (ESP) in Fall, 2014 in Monterey Bay, CA | abundance of non-pigmented bacteria (distinguished based on DNA content (Hoechst stain) and scatter signatures)
| Hbact_mL |
| Experimental and survey biogeochemical and microbial data from R/V Point Sur cruises PS1009 and PS1103 in the Santa Barbara Channel from 2010-2011 (SBDOM project, SBC LTER project) | Total Bacterial cell count by flow cytometry
| tot_bact_cells |
| Iron concentrations of phage from experiments of iron-labelled E. coli infected with T4 and T5 bacteriophage, 2018 and 2019. | SYBR epifluorescence bacterial counts
| bact_cells_ml |
| Brine samples from both sea ice and cryopeg near Utqiaġvik, Alaska, USA from 2017-05-08 to 2018-05-10 | Bacterial abundance
| Bacterial_abundance |
| Experimental results: Exopolymer and carbohydrate production by diatoms with growth; conducted at the Thornton lab, TAMU from 2007-2012 (Diatom EPS Production project) | Bacteria abundance determined by DAPI staining and counts using an epifluorescence microscope (Porter & Feig 1980).
| bacteria |
| Phytoplankton diversity along with carbon and nitrogen uptake rates collected along the GO-SHIP IO9 repeat hydrography section of the Indian Ocean from R/V Roger Revelle cruise RR1604 from March to April 2016 | Count of high-nucleic acid heterotrophic bacteria
| HNA_bacteria |
| Phytoplankton diversity along with carbon and nitrogen uptake rates collected along the GO-SHIP IO9 repeat hydrography section of the Indian Ocean from R/V Roger Revelle cruise RR1604 from March to April 2016 | Count of low-nucleic acid heterotrophic bacteria
| LNA_bacteria |
| Microbial Biomass and Productivity from ARSV Laurence M. Gould, RVIB Nathaniel B. Palmer LMG0402, NBP0606 in the Southern Drake Passage and Scotia Sea from 2004-2006 (BWZ project) | Abundance of bacteria; Bacteria
| Bact_abund |
| Abundances of mixotrophic, phototrophic, and heterotrophic nanoflagellates, and associated environmental data, synthesized from the scientific literature. | bacteria
| Bacteria |
| Biogeochemical and microbial field surveys from the BATS site, Bermuda from R/V Atlantic Explorer cruises from 2009-2013 (Ocean Microbial Observatory project) | Bacterioplankton abundance by microscopy. Methodological reference: Porter, K.G. and Y.S. Feig (1980)
| bact_abund |
| Environmental and physical data associated with ocean acidification microbe adaptation from 2012-2014 | Concentration of bacteria; Sample A; Includes Archaea and Prochlorococcus
| bacteriaA |
| Environmental and physical data associated with ocean acidification microbe adaptation from 2012-2014 | Concentration of bacteria; Sample B; Includes Archaea and Prochlorococcus
| bacteriaB |
| Plankton abundances from phytoplankton experiments on the RVIB Nathaniel B. Palmer NBP0608 cruise in the Ross Sea, Southern Ocean during 2006(CORSACS project, Antarctic microzooplankton project) | Bacterial abundance.
| bacteria |
| Aggregation phase of Skeletonema marinoi growth and aggregation from UCSB MSI Passow Lab from 2009 to 2010 (OA - Ocean Acidification and Aggregation project) | Bacterial Cells/Tank - Aggregates
| Bacterial_Cells_Aggregates |
| Aggregation phase of Skeletonema marinoi growth and aggregation from UCSB MSI Passow Lab from 2009 to 2010 (OA - Ocean Acidification and Aggregation project) | Bacterial Cells/Tank - Background
| Bacterial_Cells_Background |
| Cell growth phase of Skeletonema marinoi growth and aggregation under future ocean acidification conditions from UCSB MSI Passow Laboratory from 2009 to 2010 (OA - Ocean Acidification and Aggregation project) | Bacterial Concentration
| Bacteria |
| Environmental data for SPOT virus sampling in Southern California during 2014 (Bacterial, Archaeal, and Protistan Biodiversity project) | bacterial abundance
| bact_abun |
| Cell abundance, nutrient and DMSP concentrations measured during a mesocosm study of the effect of phytoplankton composition on bacterial DMSP transformation (OceanSulfurFluxBact project) | Number of bacterial cells per ml of culture; determined by flow cytometry
| Ruegeria_pomeroyi |
| Results from growth rate experiment with the diatom Thalassiosira wessiflogii in semi-continuous culture; conducted at the Thornton lab, TAMU from 2007-2012 (Diatom EPS Production project) | Bacteria abundance determined by DAPI staining and counts using an epifluorescence microscope (Porter & Feig 1980).
| bacteria |
| Viral and bacterial counts from filtered water, stained with SYBR Green and counted using epifluorescent microscopy, from samples collected on R/V Knorr cruise KN210-04 in the Western Atlantic Ocean in 2013 (Deep Atlantic DOM project) | Bacterial abundance.
| bact_abund |
| Water Column Chemical and Biological Inventories from the Arctic Ocean from 2010-2012 (ArcticNITRO project) | Flow cytometer counts using CYBR gold
| Bacterial_Abundance |
©2020 Biological and Chemical Oceanography Data Management Office.