| GenBank accession numbers for algae species sequenced in Antartica, California, and Fiji. | Gene name
| sequence_types |
| Peptides associated with scaffold-derived metaproteomic proteins from samples taken during R/V Atlantic Explorer cruise AE1913 from the Sargasso Sea to Northeast US shelf waters in June of 2019 | Peptide genomic sequence (unique sequence in dataset)
| peptide_sequence |
| Amplicon sequence variants (ASVs) and taxonomy of Pseudo-nitzschia spp. from Narragansett Bay in Rhode Island, USA and the Northeast U.S. Shelf (NES-LTER transect) from 2018-2023 | DNA sequence of Amplicon Sequence Variant (ASV)
| ASV_seq |
| Sampling locations and identifications for larvae collected near three deep-sea hydrothermal vent fields from 2007 to 2017 | Link to the larval 28S genetic sequence data in the Dryad repository doi:10.5061/dryad.sqv9s4n18 with specimen identifier, associated with the taxon in the Occurrence record. Darwin Core term http://rs.tdwg.org/dwc/terms/associatedSequences
| associatedSequences |
| Diatom amplicon sequencing variants (ASVs) from Narragansett Bay, Rhode Island, USA from 2008-2014 | Amplicon Sequence Variant (ASV) obtained from sequence processing
| ASV |
| FASTA file of protein identifications from R/V Kilo Moana KM1128 in the North Pacific during 2011 (MetZyme project) | Precursors from all METZYME stations
| sequence |
| Gnathiid blood meal identification results | The mtDNA sequence entered into BLAST
| BLAST_sequence |
| Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019 | Uniprot KB entry identifies the top BLAST (Basic Local Alignment Search Tool) hit sequence to the assembled nucleotide sequence, searches were conducted using the blastx algorithm, #N/A indicates that there was no positive BLAST hit that met the e-value threshold
| Entry |
| Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019 | The Trinity software names assembled by Trinity software are named hierarchically grouping sequences by similarity
| seq_id |
| Results of 18S sequencing of full-length 18S rDNA for metabarcoding samples collected during R/V Point Sur cruise PS18-09 in the Western Gulf of Mexico in September 2017 | OTU sequence generated from the HRR data
| Sequence_ID |
| Metabarcoding samples collected from surface and chlorophyll maximum depths from R/V Pt. Sur PS 18-09 Legs 01 and 03, Hurricane Harvey RAPID Response cruise (western Gulf of Mexico) September-October 2017. | OTU sequence generated from the HRR data
| Sequence_ID |
| Macrofauna collected on colonization panels at Snail Vent Field on the Mariana Back-arc in 2014 | Genetic sequence information associated with the Occurrence. We provide a full URL path; the sequence identifier at the end of the URL, starting with SNLBE, is persistent
| associatedSequences |
| Microbial taxa (amplicon sequence variant or ASV) statistical analyses for two seagrass genotypes from wasting disease mesocosm experiments at Bodega Marine Laboratory in July-Sept of 2015 | Amplicon Sequence Variant (ASV) unique DNA base pair sequence of the V4-V5 region of the 16S rRNA gene; A = adenine; C = cytosine; G = guanine; T = thymine
| Sequence |
| Metabarcoding zooplankton at station ALOHA: Operational taxonomic unit (OTU) tables and fasta files for representative sequences from each OTU (Plankton Population Genetics project) | Query sequence (BLAST qseqid); header description of representative sequence from fasta file
| NCBI_query_sequence_id |
| Gene expression profiles for Neocalanus flemingeri pre adults (CV) exposed to four different experimental food conditions collected from the M/V Dora in the Gulf of Alaska at station GAK1 from April 2019 | Sequence identification using Trinity identification of assembled transcripts
| seq_id |
| Targeted proteome analyses of the nitrite-oxidizing bacterium Nitrospira marina grown under atmospheric and low oxygen concentrations | Peptide sequences of the isotopically labelled peptide standards used to quantify the target proteins
| Peptide_sequence |
| NCBI accession numbers describing nifH amplicon sequences from sediment samples collected offshore of San Francisco, Califronia, USA in March 2017 on R/V Oceanus cruise OC1703A | PCR primer sequences
| PCR_primers |
| NCBI accession numbers describing nifH amplicon sequences from sediment samples collected offshore of San Francisco, Califronia, USA in March 2017 on R/V Oceanus cruise OC1703A | Illumina adapter sequences
| Sequencing_adapters |
| OTU, sequences, and accessions from long-term monitoring sites in St. John, USVI. | DNA sequence
| DNA_Sequence |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from April at 150m depth at SPOT
| April_150m_cDNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | DNA sequences from April at 150m depth at SPOT
| April_150m_DNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from April at 5m depth at SPOT
| April_5m_cDNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | DNA sequences from April at 5m depth at SPOT
| April_5m_DNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from April at 890m depth at SPOT
| April_890m_cDNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | DNA sequences from April at 890m depth at SPOT
| April_890m_DNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from April at the surface at Catalina Island
| April_CAT_cDNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | DNA sequences from April at the surface at Catalina Island
| April_CAT_DNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from April at the DCM at SPOT
| April_DCM_cDNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | DNA sequences from April at the DCM at SPOT
| April_DCM_DNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from April at the surface at the Port of Los Angeles
| April_POLA_cDNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | DNA sequences from April at the surface at the Port of Los Angeles
| April_POLA_DNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from Jan at 150m depth at SPOT
| Jan_150m_cDNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | DNA sequences from Jan at 150m depth at SPOT
| Jan_150m_DNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from Jan at 5m depth at SPOT
| Jan_5m_cDNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | DNA sequences from Jan at 5m depth at SPOT
| Jan_5m_DNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from Jan at 890m depth at SPOT
| Jan_890m_cDNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | DNA sequences from Jan at 890m depth at SPOT
| Jan_890m_DNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from Jan at the surface at Catalina Island
| Jan_CAT_cDNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | DNA sequences from Jan at the surface at Catalina Island
| Jan_CAT_DNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from Jan at the DCM at SPOT
| Jan_DCM_cDNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | DNA sequences from Jan at the DCM at SPOT
| Jan_DCM_DNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from Jan at the surface at the Port of Los Angeles
| Jan_POLA_cDNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | DNA sequences from Jan at the surface at the Port of Los Angeles
| Jan_POLA_DNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from July at 150m depth at SPOT
| July_150m_cDNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | DNA sequences from July at 150m depth at SPOT
| July_150m_DNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from July at 5m depth at SPOT
| July_5m_cDNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | DNA sequences from July at 5m depth at SPOT
| July_5m_DNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from July at 890m depth at SPOT
| July_890m_cDNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | DNA sequences from July at 890m depth at SPOT
| July_890m_DNA |
| Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 | RNA(cDNA) sequences from July at the surface at Catalina Island
| July_CAT_cDNA |
©2020 Biological and Chemical Oceanography Data Management Office.