| Peptides associated with scaffold-derived metaproteomic proteins from samples taken during R/V Atlantic Explorer cruise AE1913 from the Sargasso Sea to Northeast US shelf waters in June of 2019 | Sum of spectral counts (+2, +3, +4 ions)
| spectral_count_sum |
| Scaffold-derived metaproteomic exclusive and total spectral counts associated with proteins from samples taken during R/V Atlantic Explorer cruise AE1913 from the Sargasso Sea to Northeast US shelf waters in June of 2019 | Spectral count
| spectral_count |
| The global proteome of replete laboratory cultures of Alteromonas macleodii MIT1002 | Exclusive unique spectral counts for proteins in sample MIT1002_CS_a1
| MIT1002_CS_a1_SC |
| The global proteome of replete laboratory cultures of Alteromonas macleodii MIT1002 | Exclusive unique spectral counts for proteins in sample MIT1002_CS_b1
| MIT1002_CS_b1_SC |
| The global proteome of replete laboratory cultures of Alteromonas macleodii MIT1002 | Exclusive unique spectral counts for proteins in sample MIT1002_CS_c1
| MIT1002_CS_c1_SC |
| Peptides and their spectral counts from KM1128 the METZYME expedition on R/V Kilo Moana in the tropical North Pacific in 2011 | Number of identified +2H spectra
| number_of_identified_pos2H_spectra |
| Peptides and their spectral counts from KM1128 the METZYME expedition on R/V Kilo Moana in the tropical North Pacific in 2011 | Number of identified +3H spectra
| number_of_identified_pos3H_spectra |
| Peptides and their spectral counts from KM1128 the METZYME expedition on R/V Kilo Moana in the tropical North Pacific in 2011 | Number of identified +4H spectra
| number_of_identified_pos4H_spectra |
| Peptides and their spectral counts from KM1128 the METZYME expedition on R/V Kilo Moana in the tropical North Pacific in 2011 | Sum of +2+3 +4 data = total unnormalized spectral counts - Quantitative Value
| sum_spectral_counts |
| Relative protein abundance from scaled and corrected exclusive peptide spectral counts from the ProteOMZ R/V Falkor expedition cruise FK160115 in the Pelagic central Pacific Ocean in 2016 | Exclusive Sum of +2 +3 +4 data = total unnormalized spectral counts; Quantitative Value
| Exclusive_Sum_PSM |
| Relative protein abundance from scaled and corrected exclusive peptide spectral counts from the ProteOMZ R/V Falkor expedition cruise FK160115 in the Pelagic central Pacific Ocean in 2016 | Count of +2H spectra
| Number_of_identified_plus2H_spectra |
| Relative protein abundance from scaled and corrected exclusive peptide spectral counts from the ProteOMZ R/V Falkor expedition cruise FK160115 in the Pelagic central Pacific Ocean in 2016 | Count of +3H spectra
| Number_of_identified_plus3H_spectra |
| Relative protein abundance from scaled and corrected exclusive peptide spectral counts from the ProteOMZ R/V Falkor expedition cruise FK160115 in the Pelagic central Pacific Ocean in 2016 | Count of +4H spectra
| Number_of_identified_plus4H_spectra |
| Total spectral counts of peptides from the R/V Falkor cruise 160115 in the Central Pacific for the ProteOMZ expedition in 2016 | Number of identified spectral counts for a peptide of the +2 charge state
| plus2H_spectra_count |
| Total spectral counts of peptides from the R/V Falkor cruise 160115 in the Central Pacific for the ProteOMZ expedition in 2016 | Number of identified spectral counts for a peptide of the +3 charge state
| plus3H_spectra_count |
| Total spectral counts of peptides from the R/V Falkor cruise 160115 in the Central Pacific for the ProteOMZ expedition in 2016 | Number of identified spectral counts for a peptide of the +4 charge state
| plus4H_spectra_count |
| Total spectral counts of peptides from the R/V Falkor cruise 160115 in the Central Pacific for the ProteOMZ expedition in 2016 | The sum of spectral counts for all peptide proton ionzation states. Sum of +2 +3 +4 data = total unnormalized spectral counts; Quantitative Value
| spectral_count_sum |
| Total spectral count of proteins from R/V Falkor cruise 160115 for the ProteOMZ expedition in the Central Pacific in 2016 | Spectral count of each protein
| spectral_count_sum |
| Ross Sea metaproteome peptide spectral counts searched against Phaeocystis strain transcriptome from net tows during RVIB Nathaniel B. Palmer cruise NBP0601 in December of 2015 | Sum of spectral counts (+2, +3, +4 ions)
| spectral_count_sum |
| Ross Sea metaproteome protein spectral counts searched against Phaeocystis strain transcriptome from net tows during RVIB Nathaniel B. Palmer cruise NBP0601 in December of 2015 | Spectral count
| spectral_count |
| The global proteome of replete laboratory cultures of Ruergeria pomeroyi DSS-3 | Exclusive unique spectral counts for proteins in sample DSS3_a1
| DSS3_a1_SC |
| The global proteome of replete laboratory cultures of Ruergeria pomeroyi DSS-3 | Exclusive unique spectral counts for proteins in sample DSS3_b1
| DSS3_b1_SC |
| The global proteome of replete laboratory cultures of Ruergeria pomeroyi DSS-3 | Exclusive unique spectral counts for proteins in sample DSS3_c1
| DSS3_c1_SC |
| Total spectral count of proteins from R/V Kilo Moana cruise KM1128 for the METZYME expedition in the tropical North Pacific in 2011. | Spectral count of proteins at each station and depth
| spectral_count |
| Net tow metaproteoome of Trichodesmium species mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes in units of normalized peptide spectral counts from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018 | Peptide in the 2+ state spectral count
| plus_2H_spectra_count |
| Net tow metaproteoome of Trichodesmium species mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes in units of normalized peptide spectral counts from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018 | Peptide in the 3+ state spectral count
| plus_3H_spectra_count |
| Net tow metaproteoome of Trichodesmium species mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes in units of normalized peptide spectral counts from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018 | Peptide in the 4+ state spectral count
| plus_4H_spectra_count |
| Net tow metaproteoome of Trichodesmium species mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes in units of normalized peptide spectral counts from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018 | Sum of spectral counts (+2, +3, +4 ions)
| spectral_count_sum |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 380 uatm CO2 Fe limited; first replicate
| pCO2_380plusFelim_1 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 380 uatm CO2 Fe limited; second replicate
| pCO2_380plusFelim_2 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 380 uatm CO2 Fe limited; third replicate
| pCO2_380plusFelim_3 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 380 uatm CO2 iron/phosphorus co-limited; first replicate
| pCO2_380plusFePlim_1 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 380 uatm CO2 iron/phosphorus co-limited; second replicate
| pCO2_380plusFePlim_2 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 380 uatm CO2 iron/phosphorus co-limited; third replicate
| pCO2_380plusFePlim_3 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 380 uatm CO2 P limited; first replicate
| pCO2_380plusPlim_1 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 380 uatm CO2 P limited; second replicate
| pCO2_380plusPlim_2 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 380 uatm CO2 P limited; third replicate
| pCO2_380plusPlim_3 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | these columns are spectral counts defined as the total number of spectra identified for a protein; a semiquantitative measure of protein abundance; 380 uatm CO2-replete nutrients (unlimited Fe and P); first replicate
| pCO2_380_1 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 380 uatm CO2-replete nutrients (unlimited Fe and P); second replicate
| pCO2_380_2 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 380 uatm CO2-replete nutrients (unlimited Fe and P); third replicate
| pCO2_380_3 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 750 uatm CO2 Fe limited; first replicate
| pCO2_750plusFelim_1 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 750 uatm CO2 Fe limited; second replicate
| pCO2_750plusFelim_2 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 750 uatm CO2 Fe limited; third replicate
| pCO2_750plusFelim_3 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 750 uatm CO2 iron/phosphorus co-limited; first replicate
| pCO2_750plusFePlim_1 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 750 uatm CO2 iron/phosphorus co-limited; second replicate
| pCO2_750plusFePlim_2 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 750 uatm CO2 iron/phosphorus co-limited; third replicate
| pCO2_750plusFePlim_3 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 750 uatm CO2 P limited; first replicate
| pCO2_750plusPlim_1 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 750 uatm CO2 P limited; second replicate
| pCO2_750plusPlim_2 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 750 uatm CO2 P limited; third replicate
| pCO2_750plusPlim_3 |
| Trichodesmium nutrient-limited proteomes in 380 and 750 uatm CO2 from experiments conducted at the University of Southern California from 2011-2013 (HiCO2_AdaptCyano project) | 750 uatm CO2-replete nutrients (unlimited Fe and P); first replicate
| pCO2_750_1 |
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